RetrogeneDB ID:
retro_mputfur_1227
Organism:
Location:
GL897046.1:4973599-4974040 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
66.89 %
Coverage:
53.76 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1227
CTCAATGTCAGGCAAATGAAGGATGTCCTCAAATTTCTTGCAACAAGAACCCACTTGGGT
GGCACTAATCTTGACTCCCAAATGGAACAGTACATCTGCAGAAGGAAAACTGATGGCATC
TATATAAAAAATCTGAAGACAACCTGGGAGAAGCTTCTGCTGGCAGCTCACACCATTGTT
GCCATTAAAAACTCGGGTGTTGTTGTGAGTACCATATCCTCCAGGAATACCAGCCTGTGG
GCTGTGCTGACGTATGCAGTTACCCCCAGAGCTATGCCTACTGAGGCACGCTTCACCTCT
GGAACCTTCACCAACCAGATCCAGGCAACCTCCCCATGTCTTCTGGGGGTGACTGACTCC
AGGGCCAACCACTGGCCTCTCACAGAGGTATCTTATGTTAACCCACGTACCATCGCCCTG
TGGAACAGACTCTCCCCTATG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
LDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENP-ADVSVISSRNTGQRAVLKFAAATGATPIAGRF
L.V.QMK..DVLKFLA..THLGGTNLD.QMEQYI..RK.DGIYI.NLK.TWEKLLLAA..IVAI.N....VS.ISSRNT...AVL..A....A.P...RF
Retrocopy
LNVRQMK--DVLKFLATRTHLGGTNLDSQMEQYICRRKTDGIYIKNLKTTWEKLLLAAHTIVAIKNSGVVVSTISSRNTSLWAVLTYAVTPRAMPTEARF


Parental protein
TPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPL
T.GTFTNQIQA....P.LL.VTD.RA.H.PLTE.SYVN..TIAL.N..SP.
Retrocopy
TSGTFTNQIQAT--SPCLLGVTDSRANHWPLTEVSYVNPRTIALWNRLSPM


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide