RetrogeneDB ID:
retro_mputfur_123
Organism:
Location:
GL897063.1:1800948-1801413 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
91.67 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_123
ATGGCGCCGAAAGCTAAGAAAGAAGCCCCTGCCCCTCCCAAAGCCGAAGCCAAAGCAAAG
GCTTTGAAAGCCAAGAAAGCGGCGCTGAAGGGCGTCCACAGTCACAAAAAAAGGATCCGC
AGGTCACCTACATTCGGACGACCCAAGACTTTGCCTCTCGGAAGGCAACCCAAATACCCT
CGAAAGAGCGCCCCCAGGAGAAACAAGCTTGACCACTATGCCATCATCAAGTTCCCCCTG
ACTACTGAGTCAGCCACGAAGAAAAGAGAAGACAACAACACACTTGTGTTCATTGTGGAT
GTCAGGGCCAACAAGCACCAGATCAAACAGGCTGTGAAGAAGCTCTATGACATTGATGTA
GCCAAGGTCAACACCTTAAGCAGGCCTGATGGAGAGAAGAAGGCATACGTTCGGCTGGCC
CCGAACTATGATGCTTTGGATGTTGCCAACAAAATTAGGATCATC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAPKAKKEAPAPPKAEAKAKALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIV
MAPKAKKEAPAPPKAEAKAKALKAKKA.LKGVHSHKK..IR.SPTF.RPKTL.L.RQPKYPRKSAPRRNKLDHYAIIKFPLTTESA.KK.EDNNTLVFIV
Retrocopy
MAPKAKKEAPAPPKAEAKAKALKAKKAALKGVHSHKKR-IRRSPTFGRPKTLPLGRQPKYPRKSAPRRNKLDHYAIIKFPLTTESATKKREDNNTLVFIV


Parental protein
DVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII
DV.ANKHQIKQAVKKLYDIDVAKVNTL.RPDGEKKAYVRLAP.YDALDVANKI.II
Retrocopy
DVRANKHQIKQAVKKLYDIDVAKVNTLSRPDGEKKAYVRLAPNYDALDVANKIRII


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide