RetrogeneDB ID:
retro_mputfur_1236
Organism:
Location:
GL897050.1:1158926-1159437 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
57.39 %
Coverage:
93.96 %
Frameshifts:
4
Stop codons:
3


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1236
CCAGTGCCGGCTGCCCCAGATGGAGTTGCAACCGGTGGGCTGTCTATCCCCAGGTCCAAG
GGCAACAGTGAACACGCCTTCACTGCCATCAAGCCTGATGGAGTCCAGTGCAGCCTCTTG
GGAGAGATTATGAATGTTTTGAGCAAAAGGGATTCCTCCCCATTGCTATGAAAAGAATCC
AGGCTTCAGAAGACTTTCTCAAGGAACACGACATTGACCTGAAGACTATCCTTTCTTTGT
GCCGGCCTGGTGAAGTACTTGAGATCAGGGCCTGTGGTCGCCATGGCCCGCAAGGGGCTG
AATGTGAAGACAGACCAAAGTGATGCTCTGGGAGACTAACCCTTCTTACTCCAATCCTGG
GACCATCCATGGGGATTTTTGCCTCCAGGTTGTCAGGAACATTACCCATGACAGCAATTC
CGTATAGAGTGCAGAGAAGGAGACTGGCTTGTGATTTTGGCCTGAAGAGCTGGTAGATTA
GAAGAGCTGTGCTCAGAACCGGATCCACGAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
PGSCVPEAAGPEPTCRPQAMAHQERTFIAIKPDGVQRGLVGEII-KRFEQKGFRLVAMKFLQASQELLKQHYIDLK-DRP-FFP-GLVKYMNSGPVVAMV
P....P..........P......E..F.AIKPDGVQ..L.GEI....FEQKGF...AMK..QAS...LK.H.IDLK.D.P.F.P.GLVKY..SGPVVAM.
Retrocopy
PVPAAPDGVATGGLSIPRSKGNSEHAFTAIKPDGVQCSLLGEIM/ECFEQKGFLPIAMKRIQASEDFLKEHDIDLK/DYPFFVP/GLVKYLRSGPVVAMA


Parental protein
WEGLNVVKTG-RMMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVKSAEKEISLWFKPEELVDYKSCAFDWIYE
..GLNV.KT....ML.ETNP..S.PGTI.GDFC.QV.RNI.H.S.SV.SAEKE..L.F.PEELVD.KSCA...I.E
Retrocopy
RKGLNV-KTD\KVMLWETNPSYSNPGTIHGDFCLQVVRNITHDSNSV*SAEKETGL*FWPEELVD*KSCAQNRIHE


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide