RetrogeneDB ID:
retro_mputfur_1237
Organism:
Location:
GL897050.1:2139885-2140386 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
79.76 %
Coverage:
55.08 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
KIAA1191
Parental gene aliases:
No gene alias available
Parental gene description:
KIAA1191 [Source:HGNC Symbol;Acc:29209]

Genomic region (view in browser)





>retro_mputfur_1237
CTTACCTCCAAGGAGACCAAGTATCTTCAAGTGACAGAAGTGCTCCACAAACTAAAGCTA
CAGAGTAGAGGGATACTGAGAGAAGAGAAGCAGCCAGCCTCGGCCCAGTCCACCCCAAGC
AACAGCCCCCACTCTTCCCTTCAGCACAAGTCCAGAGGCTGGCTCACTTCTGGTCCTTCC
ACAGCCTTACCTGGCCCATACCCTGGCACCATGGATTCTGCAAGTGGGGACAAGGACAAA
AACTTGGTGGATAAATGGAGACTTTTTGGACCAAGATCCCTCCAGAAGTCTGATTCAGGA
GGTTTTGCCATCCAGACTTACAGAGGAGCCCAGAAGCCTCCAATGGAACTGATTCATGTC
CAGGCCACCCAAATGGCCAAAGATCCAGCAACCTTCAAGCCACCCAAGATGGACATGCTA
TTGATGGAAGGGAAGAAACCACTGCCGCAGACCCATAATCTCAAACCCCTTGACTTAAAT
GTGCTCACACCCACTGGCTTC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
LTTEETKYLRVAEALHKLKLQSGEITREEKQSASAQSTPSSSPHPSPKQKSRGWFNSGPSTALPGPNPGTMDSAGGDKDKNMADKWSLFGPRSLQKSDSG
LT..ETKYL.V.E.LHKLKLQS..I.REEKQ.ASAQSTPS.SPH.S...KSRGW..SGPSTALPGP.PGTMDSA.GDKDKN..DKW.LFGPRSLQKSDSG
Retrocopy
LTSKETKYLQVTEVLHKLKLQSRGILREEKQPASAQSTPSNSPHSSLQHKSRGWLTSGPSTALPGPYPGTMDSASGDKDKNLVDKWRLFGPRSLQKSDSG


Parental protein
GFATQAYRGAQKPSPMELIRVQATRMAEDPATFKPPKMDIPVMEGKKPQARTHNLKPRDLNVLTPTGF
GFA.Q.YRGAQKP.PMELI.VQAT.MA.DPATFKPPKMD...MEGKKP...THNLKP.DLNVLTPTGF
Retrocopy
GFAIQTYRGAQKP-PMELIHVQATQMAKDPATFKPPKMDMLLMEGKKPLPQTHNLKPLDLNVLTPTGF


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide