RetrogeneDB ID:
retro_mputfur_1238
Organism:
Location:
GL897051.1:879083-879396 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
59.81 %
Coverage:
60.0 %
Frameshifts:
2
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1238
CGGCGAGTAGCCCGAGGGAAGTTCAAGGGTGCCAAGTGTCTCCTGAAGATGCAAACCCAG
CCCAGCTGCTGGGTTTTCCTCTAGGAAGTGCAAAAGTTGTCCCAAAGTGAGGGGGGTGAA
ACCCAGGATGCCATGGGAGCTGCTATGGTCCCGAAGAAGAAAATGAACCAAGCCCTTCTG
GATCTGCAAGCCCTGGGTTCCACCTCGTAGACCTCCGTCTCTCTAACTTCCTAGAGAATC
ACTTCCTGGTTGAGGAAATAAAACTTATCAAGAAGATGGTTACCACCTGACTAACCTCCA
CAGGCTGGCTGGC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
RELAEEKREGAERLLKMQNQRGGRALFQDVQKPSQDEWGKTLDAMEAALVLEKSLNQALLDLHALGSAR-TDPHLCDFLENHFLDEEVKLIKKM-GDHLT
R..A..K..GA..LLKMQ.Q.........VQK.SQ.E.G.T.DAM.AA.V..K..NQALLDL.ALGS....D..L..FLENHFL.EE.KLIKKM.G.HLT
Retrocopy
RRVARGKFKGAKCLLKMQTQPSCWVFL*EVQKLSQSEGGETQDAMGAAMVPKKKMNQALLDLQALGSTS/VDLRLSNFLENHFLVEEIKLIKKM/GYHLT


Parental protein
NLRRLAG
NL.RLAG
Retrocopy
NLHRLAG


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide