RetrogeneDB ID:
retro_mputfur_1239
Organism:
Location:
GL897051.1:3383750-3384086 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
75.0 %
Coverage:
99.12 %
Frameshifts:
0
Stop codons:
1


Parental gene:
Parental gene symbol:
EIF1
Parental gene aliases:
No gene alias available
Parental gene description:
eukaryotic translation initiation factor 1 [Source:HGNC Symbol;Acc:3249]

Genomic region (view in browser)





>retro_mputfur_1239
TCCCCTATCCAGAACCTCTACTCTTCCCACCCCTCTCCTGATGCAAGGAAGGGGGACGGT
CTCTTTCCTGGTGGCACTGAGGATTACAGCCATATACGAATTTAACAGAGAAAAAGCAGG
AAGACCCTTACTACCATCCAGGGAATCGCTGATGATTTTGATAAAAAGAAACTAGTGAAG
ACGTTTAAGAAGAAATTTGCCTGCATTTGTCCTGTGCTTGAACATCCAGAATATGGAGAA
GTAATTCCACTATGGGGTGATTCGCGTGAGAACATATGCCAGTTCCCGGAAGAGACTGGA
TTGGCTAAGGACGACCAGCTGAAGGTTCATGGGTTT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
SAIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIG
S.IQNL.S..P..DA.KGD.L.P.GTEDY.HIRI.QR..RKTLTT.QGIADD.DKKKLVK.FKKKFAC...V.EHPEYGEVI.L.GD.R.NICQF..E.G
Retrocopy
SPIQNLYSSHPSPDARKGDGLFPGGTEDYSHIRI*QRKSRKTLTTIQGIADDFDKKKLVKTFKKKFACICPVLEHPEYGEVIPLWGDSRENICQFPEETG


Parental protein
LAKDDQLKVHGF
LAKDDQLKVHGF
Retrocopy
LAKDDQLKVHGF


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide