RetrogeneDB ID:
retro_mputfur_1246
Organism:
Location:
GL897053.1:2603486-2603889 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
50.72 %
Coverage:
77.71 %
Frameshifts:
2
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1246
AATTATTCCACCAAGGTGGAAGTCACCATCAACTACCCAGTCAACCTGCACCTGCAGGCC
TCCTATATCTCCTCTAAGGGCCTCTGTTCCAACCATGAGGACATGTCTCAGAGGGTGTGG
GCCACTTTTCTCATGAGCTGGTCAAGGAGAAGTGCAAGGGTGCTGAGTATCTCTTGAAGA
TGCAAAAGCATTGTGGTGGCCACACCCTTTTCCAGGGCATACAAAAGCCATCCCAAGATG
AGCAGGGTTAAACTTTGAATACCGTGGAAGCTGCCATGGTCCTGGAGAAGAACCAGAATA
AGGTTGCTGTGCATCGGGATGCATGGGTTCTACCTGTGCAGATCCGCATCTGATTTCCTA
CAGAAAATCAGAATACTTCCTAGTTAAGGTGAAACTCATCAAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
NYSTEVEAAVNRLVNMHLRASYTYLSLGFYFDRDDVAL-EGVGHFFRELAEEKREGAERLLKMQNQRGGRALFQDVQKPSQDEWGKTLDAMEAALVLEKS
NYST.VE...N..VN.HL.ASY...S.G......D....EGVGHF..EL..EK..GAE.LLKMQ...GG..LFQ..QKPSQDE.G.TL...EAA.VLEK.
Retrocopy
NYSTKVEVTINYPVNLHLQASYIS-SKGLCSNHEDMSQ/EGVGHFSHELVKEKCKGAEYLLKMQKHCGGHTLFQGIQKPSQDEQG*TLNTVEAAMVLEKN


Parental protein
LNQALLDLHA-LGSARTDPHLCDFLENHFLDEEVKLIK
.N.......A..GS...DPHL............VKLIK
Retrocopy
QNKVAVHRDA/MGSTCADPHLISYRKSEYFLVKVKLIK


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide