RetrogeneDB ID:
retro_mputfur_125
Organism:
Location:
GL897076.1:2212559-2213078 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
99.42 %
Coverage:
80.75 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
Mitochondrial ribosomal protein L17 [Source:UniProtKB/TrEMBL;Acc:G9KBA6]

Genomic region (view in browser)





>retro_mputfur_125
ATGCGGCTGTCAGTTGCAGCCGCCATCTCCCATGGCCGCGTATTCCGCCGTCTGGGCCTT
GGTCCGGAGTCCCGCATCCACCTGTTGAGGAACTTGCTTACAGGCTTGGTGCGACACGAA
AGCATCGAGGCGTCATGGGCGCGCGTGGACGAAATGAGGGGCTACGCCGAGAAGCTCATC
GACTATGGGAAGCTGGGAGACACTAACGAACAAGCCATGCGCATGGCCGACTTCTGGCTT
ACGGAGAAAGACTTGATCCCAAAGCTGTTTCAAGTACTGGCCCCTCGTTACCAAGGTCAA
AATGGGGGCTACACGAGAATGCTGCAGATCCCAAATAGCAGTGAGCAGGATCGGGCCAAG
ATGGCAGTGATCGAGTATAAGGGGAACTGCCTCCCACCCCTACCGGTGCCTCGCAGAGAC
AGCAACCTTACACTTCTAAACCAGCTGCTTCAAGGGTTGCAGCAAGACCAGAAAGCAAGC
ATCCACGGCTCCCACACAGCTCAAACGCCAGGGATTTAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MRLSVAAAISHGRVFRRLGLGPESRIHLLRNLLTGLVRHERIEASWARVDEMRGYAEKLIDYGKLGDTNEQAMRMADFWLTEKDLIPKLFQVLAPRYQGQ
MRLSVAAAISHGRVFRRLGLGPESRIHLLRNLLTGLVRHE.IEASWARVDEMRGYAEKLIDYGKLGDTNEQAMRMADFWLTEKDLIPKLFQVLAPRYQGQ
Retrocopy
MRLSVAAAISHGRVFRRLGLGPESRIHLLRNLLTGLVRHESIEASWARVDEMRGYAEKLIDYGKLGDTNEQAMRMADFWLTEKDLIPKLFQVLAPRYQGQ


Parental protein
NGGYTRMLQIPNSSEQDRAKMAVIEYKGNCLPPLPVPRRDSNLTLLNQLLQGLQQDQKASIHGSHTAQTPGI
NGGYTRMLQIPNSSEQDRAKMAVIEYKGNCLPPLPVPRRDSNLTLLNQLLQGLQQDQKASIHGSHTAQTPGI
Retrocopy
NGGYTRMLQIPNSSEQDRAKMAVIEYKGNCLPPLPVPRRDSNLTLLNQLLQGLQQDQKASIHGSHTAQTPGI


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide