RetrogeneDB ID:
retro_mputfur_1251
Organism:
Location:
GL897054.1:5378771-5379232 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
76.77 %
Coverage:
92.77 %
Frameshifts:
1
Stop codons:
1


Parental gene:
Parental gene symbol:
MGST3
Parental gene aliases:
No gene alias available
Parental gene description:
microsomal glutathione S-transferase 3 [Source:HGNC Symbol;Acc:7064]

Genomic region (view in browser)





>retro_mputfur_1251
GCCAGCATGACTGTCCTCTCTAAGGAACGTGGTTTTGTGTTTCTGACCTGTACTGCCAGC
TTCATAATGGTAGCTCATCTAGCCATCAGTGTTTCCAAGGCCCAAAAGAAGTACCAAGTG
AAGTATCCTACCATGTACAGCATGGACCCGAAAACAGACACCTTTTCAACCACGTTCAGC
ACGTCCACGAGAACACATTGAAAGTATAACCACCCTTCTTATTTTTCCTAGATGTTGGAG
GTGTTTACCACCCAGGTATAGTTTCTGGCCTAGCCTTGGCCCGGATTGTTGGACAAGTTC
TTTATGCTTATGGCTGTTACACAAGAGAGCCCAGCAAGCAGAGTCGAGGAGCCCTGGGCT
CCATAGACCTCACAGGCCTAATGGGCACAATGGTGTGCTCTGCCTTCCAGCATCTTGGTT
GGGTTAAAACTGGCTTGGGCAGTGGGTCCAAATGCTGCCAT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
ASMAVLSKEYGFVVLTGAASFIMVAHLAINVSKARKKYKVEYPTMYSTDP-ENGHLFNCIQRAHQNTLEVYSPFLFFLAVGGVYHPRVASGLGLAWIVGR
ASM.VLSKE.GFV.LT..ASFIMVAHLAI.VSKA.KKY.V.YPTMYS.DP.EN.HLFN..Q..H.NTL.V..PFLFFL.VGGVYHP...SGL.LA.IVG.
Retrocopy
ASMTVLSKERGFVFLTCTASFIMVAHLAISVSKAQKKYQVKYPTMYSMDP/ENRHLFNHVQHVHENTLKV*PPFLFFLDVGGVYHPGIVSGLALARIVGQ


Parental protein
VLYAYGYYTGEPSKRSRGVVGSIALIGLMGTTVCSAFQHLGWVKTGLGGGSKCCH
VLYAYG.YT.EPSK.SRG..GSI.L.GLMGT.VCSAFQHLGWVKTGLG.GSKCCH
Retrocopy
VLYAYGCYTREPSKQSRGALGSIDLTGLMGTMVCSAFQHLGWVKTGLGSGSKCCH


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide