RetrogeneDB ID:
retro_mputfur_1259
Organism:
Location:
GL897058.1:4754546-4754992 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
67.33 %
Coverage:
79.03 %
Frameshifts:
2
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1259
CCCTATCCCAAGACCCCAGAAGAACCAGCCACTGTTGCCAAAGAAGTATAATACGGGGGT
GGAAGACTACGAGCCATACTCAGATGACAGACAACATGGGGTGCAGCGACTACCAGAAGC
TCCCTGACCACTCTTGGCAGGAGAGGGATCCATGGTATGACTGGGACCGCCCAGGCCTGA
GGTTGAACTGGGATGAACAGATGTACTGGAACCTTGACATGTCCATCGGGAGCCTTGTGG
ACACATCTCCTTTGCCTGTTTCCTGAAATCTCATGTGTAAGCACCTCTTGGGCTTTGTGG
CCTTCATGGTATTCATGTTTCGGGGTGGGGAAACTTATGCCACCTACCAGCCCATGGGGC
CAAAGCGGTGTCCTTATAATAATCTGTACCTGGAACGAGGCAGTGATCCCACTGAAAGGC
CCAAGCTGGTGGTTCTTTATGAGATC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
PYPKTPEERAAAAK-KYNMRVEDYEPYPDDGM-GYGDYPKLP-DRSQQERDPWYNWDHSDLRLNWGEPIHWDLDMYIRNRVDTSPTPVSWNVMCKHLFGF
PYPKTPEE.A..AK.KYN..VEDYEPY.DD...G....P..P.D.S.QERDPWY.WD...LRLNW.E...W.LDM.I...VDTSP.PVS.N.MCKHL.GF
Retrocopy
PYPKTPEEPATVAK\KYNTGVEDYEPYSDDRQHGVQRLPEAP\DHSWQERDPWYDWDRPGLRLNWDEQMYWNLDMSIGSLVDTSPLPVS*NLMCKHLLGF


Parental protein
VAFMVFMFWVGETYSTYQPVGPKQYPYNNLYLERGGDPAKEPEPVVHYEI
VAFMVFMF..GETY.TYQP.GPK..PYNNLYLERG.DP...P..VV.YEI
Retrocopy
VAFMVFMFRGGETYATYQPMGPKRCPYNNLYLERGSDPTERPKLVVLYEI


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide