RetrogeneDB ID:
retro_mputfur_1261
Organism:
Location:
GL897058.1:4066544-4066994 (-)
Status:
KNOWN_PSEUDOGENE
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
96.67 %
Coverage:
85.71 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
TSEN15
Parental gene aliases:
No gene alias available
Parental gene description:
tRNA splicing endonuclease 15 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:16791]

Genomic region (view in browser)





>retro_mputfur_1261
GGCGGTGTTGGCGGCGGCGGCGGCGCCCACCCATGGGCTCCGGAGGACGCCTGGATGGGC
ACCTACCCAAAGTATTTAGAAATGATGGAATTAGATATAGGAGATGCCAGCCAAGTTTAT
ATAGCATTTTTGGTTTACCTGGACCTCATGGAGAGTAAAAGTTGGCATGAAGTAAACTGT
GTTGGATTACCAGATCTCCAGCTCATCTGCCTCATCGGTACTGAGATAGAAGGAGAAGGA
TTACGGACTGTGGTGCCTACACCCATCAGTGCTTCCCTCAGCCATAACAGGATAAGGGAG
ATTTTGAAGGCATCTCGGAAATTGCAAGGTGATCCAGATTTGCCAATGTCTTTTACTTTG
GCCATAGTGGAGTCCGATTCCACGATAGGCTACTATAAACTTACTGATGGATTTATGCTG
CCAGACCCTCAGAATATTTCCCTTAGAAGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
GGGGGGGGAHPWAPEDAWMGTHPKYLEMMELDIGDASQVYIAFLVYLDLMESKSWHEVNCVGLPDLQLICLVGTEIEGEGLQTVVPTPISASLSHNRIRE
GG.GGGGGAHPWAPEDAWMGT.PKYLEMMELDIGDASQVYIAFLVYLDLMESKSWHEVNCVGLPDLQLICL.GTEIEGEGL.TVVPTPISASLSHNRIRE
Retrocopy
GGVGGGGGAHPWAPEDAWMGTYPKYLEMMELDIGDASQVYIAFLVYLDLMESKSWHEVNCVGLPDLQLICLIGTEIEGEGLRTVVPTPISASLSHNRIRE


Parental protein
ILKASRKLQGDPDLPMSFTLAIVESDSTIVYYKLTDGFMLPDPQNISLRR
ILKASRKLQGDPDLPMSFTLAIVESDSTI.YYKLTDGFMLPDPQNISLRR
Retrocopy
ILKASRKLQGDPDLPMSFTLAIVESDSTIGYYKLTDGFMLPDPQNISLRR


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide