RetrogeneDB ID:
retro_mputfur_1263
Organism:
Location:
GL897059.1:563736-563999 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
79.78 %
Coverage:
58.67 %
Frameshifts:
1
Stop codons:
4


Parental gene:
Parental gene symbol:
UBE2D2
Parental gene aliases:
No gene alias available
Parental gene description:
ubiquitin-conjugating enzyme E2D 2 [Source:HGNC Symbol;Acc:12475]

Genomic region (view in browser)





>retro_mputfur_1263
TATCCCTTCAAATCACCTAAGGCTGCATTTATGACAAGAATTTATCATCCAAATATTAAC
AGTAATGGTAGCATGTGTCTCGGCATTTGAAGATCACAGTGGTCTCCAGCCTTAACTCTT
TCTAAAGTTCTTTAATCCATTTGTTCACTGCTATGTGATCCAAACCCAGGTGACCCCCTA
GTGCCAGAGACTTCATGATCTATAAAACAAGTAGAGATAAGTACAATAGAATATCTTGAG
AATAAACTCAGAAGTATGCCATG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
YPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIA-RIYKTDREKYNRIAREWTQKYAM
YPFK.PK.AF.TRIYHPNINSNGS.CL.I.RSQWSPALT.SKVL.SICSLLCDPNP.DPLVPE....IYKT.R.KYNRI..E.TQKYAM
Retrocopy
YPFKSPKAAFMTRIYHPNINSNGSMCLGI*RSQWSPALTLSKVL*SICSLLCDPNPGDPLVPETS/MIYKTSRDKYNRIS*E*TQKYAM


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide