RetrogeneDB ID:
retro_mputfur_1265
Organism:
Location:
GL897061.1:2083857-2084086 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
68.35 %
Coverage:
67.54 %
Frameshifts:
2
Stop codons:
0


Parental gene:
Parental gene symbol:
RPLP1
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein, large, P1 [Source:HGNC Symbol;Acc:10372]

Genomic region (view in browser)





>retro_mputfur_1265
ATGGCTTCAGTCTCAGAGCTCGCCTACATCTACTCGGCCCATGTCCTGCGTGACCATGAA
GTGACAGTCACAGAGGAGAAGATCAATGCCCTCATGAAATAAGCGGTGTAAATGTTGAAC
CTTCTTGGTGGGGCTTGTTTGCAAGGGCTCTGACCAGTGTCTCATCAAGAGCCTTGTCTG
CAAGGTAGAGGCTGTTGGACCTGCCCCAGCAGGAGGTTGTGCTCCATCT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MASVSELACIYSALILHDDEVTVTEDKINALIK-AAGVNVEPFWPGLFAKALANVN-IGSLICNVGAGGPAPAAGAAPA
MASVSELA.IYSA..L.D.EVTVTE.KINAL.K...GVNVEP.W.GLFA.AL..V..I.SL.C.V.A.GPAPA.G.AP.
Retrocopy
MASVSELAYIYSAHVLRDHEVTVTEEKINALMK/ISGVNVEPSWWGLFARALTSVS/IKSLVCKVEAVGPAPAGGCAPS


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide