RetrogeneDB ID:
retro_mputfur_1268
Organism:
Location:
GL897063.1:3750843-3751168 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
65.77 %
Coverage:
62.29 %
Frameshifts:
2
Stop codons:
2


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1268
GTGGCTCTGGAGGGAGGGGGCCGCTTATTCCAGGAGTTGGCTGAGGAGAAGCGCAAGGAT
GCTGAATGTCCCTTAAAGACATAAAACCAGCACTGCAGCTGTGCCCTGTTCCAGGATGTA
CAGAAGTGTCCCAAGATTAGTGGGGTAAAAACCTGGACACCATGGAAGCTGCCATGCTCC
CGGAGAAGAACGTTAATCAGGCCCTTTTGGATATGCGTGGCCTGGGTTCTGCCACACCAA
CCTCCATCTCCGTGACTTCCTAGAAAACCACTTCCCAGATGAGGAGGTGAAAGTCATCAA
GGAAATGTGCTACCACCCAACTAAC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
VALEGVGHFFRELAEEKREGAERLLKMQNQRGGRALFQDVQK-PSQDEWGKTLDAMEAALVLEKSLNQALLDLHALGSA-RTDPHLCDFLENHFLDEEVK
VALEG.G..F.ELAEEKR..AE..LK..NQ....ALFQDVQK..SQD.WGK.LD.MEAA...EK..NQALLD...LGSA..T..HL.DFLENHF.DEEVK
Retrocopy
VALEGGGRLFQELAEEKRKDAECPLKT*NQHCSCALFQDVQK/VSQD*WGKNLDTMEAAMLPEKNVNQALLDMRGLGSA/HTNLHLRDFLENHFPDEEVK


Parental protein
LIKKMGDHLTN
.IK.M..H.TN
Retrocopy
VIKEMCYHPTN


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide