RetrogeneDB ID:
retro_mputfur_127
Organism:
Location:
GL896937.1:10682531-10682987 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
99.34 %
Coverage:
94.38 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
Rps14
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein S14 [Source:MGI Symbol;Acc:MGI:98107]

Genomic region (view in browser)





>retro_mputfur_127
ATGGCACCTCGCAAGGGGAAGGAAAAGAAGGAAGAACAGGTCATCAGCCTTGGACCTCAA
GTAGCAGAAGGAGAAAATGTATTTGGTGTCTGCCACATCTTTGCATCCTTCAATGACACT
TTTGTCCATGTCACCGACCTTTCTGGCAAGGAAACCATCTGCCGTGTGACTGGTGGAATG
AAGGTGAAGGCTGATCGAGATGAGTCCTCTCCCTACGCTGCTATGTTGGCTGCCCAGGAT
GTTGCCCAGAGATGCAAGGAGCTGGGCATCACTGCCCTCCACATCAAACTACGGGCCACA
GGAGGAAATAGAACCAAGACCCCTGGACCTGGGGCCCAGTCAGCCCTCAGAGCCCTTGCC
CGCTCAGGAATGAAGATCGGGCGGATTGAGGATGTCACCCCCATCCCCTCCGATAGCACC
CGCAGGAAGGGGGGTCGCCGTGGTCGCCGTCTGTGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGXETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRAT
MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSG.ETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRAT
Retrocopy
MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRAT


Parental protein
GGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL
GGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL
Retrocopy
GGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide