RetrogeneDB ID:
retro_mputfur_1277
Organism:
Location:
GL897066.1:808962-809319 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
78.99 %
Coverage:
92.25 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1277
GCCATGGCACCCCTGAAAAAGCTCGTGGTGAAGGGGGGCAAAAAAAAGAAGCAAGTTCTG
AAGTTTACCCTTGATTGCACCCACCCTATAGAAGATGGAATCATGGATGCGGCCAATTTT
GCGCAGTTTCTTCAGGAGAGAATCAAAGTGAATGGAAAAACTGGAAATCTCGGTGGAGGG
GTTGTAACCATTGAAAGGAGCAAAAGCAAGATCACTGTAACTTCCGAGGTGCCTTTTTCC
AAAAGGTATTTGAAATATCTGACCAAAAAATACTTGAAGAAGAATAACCTCTGTGACTGG
CTGTGCGTGGTGGCCAACAGCAAGGAGAGCTACGAGCTGCGCTACTTCCAGATCAAC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
AMAPVKKLVAKGGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDW
AMAP.KKLV.KGG...KQVLKFTLDCTHP.EDGIMDAANF.QFLQERIKVNGK.GNLGGGVVTIERSKSKITVTSE...............LKKNNL.DW
Retrocopy
AMAPLKKLVVKGGXXXKQVLKFTLDCTHPIEDGIMDAANFAQFLQERIKVNGKTGNLGGGVVTIERSKSKITVTSEXXXXXXXXXXXXXXXLKKNNLCDW


Parental protein
LRVVANSKESYELRYFQIN
L.VVANSKESYELRYFQIN
Retrocopy
LCVVANSKESYELRYFQIN


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide