RetrogeneDB ID:
retro_mputfur_1278
Organism:
Location:
GL897066.1:2050954-2051473 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
89.27 %
Coverage:
53.15 %
Frameshifts:
0
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1278
CCAACTGCTTGGCTCATCCATGACAACTTTGGCATTGTGGAGGGACTCATGACCACCGTC
CATGCCATCACTGCTGCCCAGAAGACTGTGGACAGCCCCTCTGGGAAGCTGTGGCGTGAA
GGCCGAGGGGCTGCCCAGAACTTCATCCCTGCTTCCACTGTTGCGGCCAAGGCTGTAGGC
AAGGTCAACCCTGAGCTGAATGGGAAGCTCACTGGCATGGCCTTCCGTGTCCTCACCCCA
AATGTGTCTGTCATGGATCTGACCTGCTGCCTGGAGAAAGCTGCCAAATATGATGACATC
AAGAAGGCATCAGAGGGCCCCCTCAAGGGCATCCTGGGGTACACTGAGGACCAGGTTGTC
TCCTGTGACTTCAACAGTGACACCCACTCCTCTACCTTCGATGCTGGGGCTGGCATTGCT
CTCAATGACCACTTTGTCAAGCTCATTTCCTGATATGACAATGAATTTGGCTACAGCAAC
CGGCTGGTGGACCTTATGATCCACATGGCCTCCAAGGAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
PLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKAAKYDDI
P.A..IHDNFGIVEGLMTTVHAITA.QKTVD.PSGKLWR.GRGAAQN.IPAST.AAKAVGKV.PELNGKLTGMAFRV.TPNVSV.DLTC.LEKAAKYDDI
Retrocopy
PTAWLIHDNFGIVEGLMTTVHAITAAQKTVDSPSGKLWREGRGAAQNFIPASTVAAKAVGKVNPELNGKLTGMAFRVLTPNVSVMDLTCCLEKAAKYDDI


Parental protein
KKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMVHMASKE
KK....ASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIALNDHFVKLIS.YDNEFGYSNR.VDLM.HMASKE
Retrocopy
KK----ASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIALNDHFVKLIS*YDNEFGYSNRLVDLMIHMASKE


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide