RetrogeneDB ID:
retro_mputfur_129
Organism:
Location:
GL896900.1:15811888-15812230 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
62.28 %
Coverage:
99.12 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
RPLP1
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein, large, P1 [Source:HGNC Symbol;Acc:10372]

Genomic region (view in browser)





>retro_mputfur_129
ATAGCCTCCATCTTAGAGATTACCTGCATTTATTTGACCTTCACCATGCACGATGATGAG
GTGATTCAGGTCAGGGGAAATAAGCTGAATGCCCTCATTAAATCACCTAGTGTAAATGTT
GACCCTTTCTGTTTGAGCTTGTCTGAGAAGTCGCTAGCCAATATCAACATCAGGATCTTC
ATATGGAATGTTGGGGCTAGTGGGTCTGCCTTGGTAGCTGGTGCTGCCCCAGCAGGAGGT
CCTGTTCCCTCCATCACTGCTGCCCCAGCTCAGAAGGAAGTGGAAGCAAAGAAAGAAGAA
TCTGAGAAATCTGATGATGACATGGGCTTTGGTATTTTTACC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MASVSELACIYSALILHDDEVT-VTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKE
.AS..E..CIY.....HDDEV..V...K.NALIK...VNV.PF...L..K.LAN.NI...I.NVGA.G.A..AGAAPAGGP.PS..AAPA..K.VEAKKE
Retrocopy
IASILEITCIYLTFTMHDDEVIQVRGNKLNALIKSPSVNVDPFCLSLSEKSLANINIRIFIWNVGASGSALVAGAAPAGGPVPSITAAPA-QKEVEAKKE


Parental protein
ESEESDDDMGFGLF
ESE.SDDDMGFG.F
Retrocopy
ESEKSDDDMGFGIF


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide