RetrogeneDB ID:
retro_mputfur_1299
Organism:
Location:
GL897071.1:2773212-2773547 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
66.37 %
Coverage:
99.12 %
Frameshifts:
1
Stop codons:
2


Parental gene:
Parental gene symbol:
EIF1
Parental gene aliases:
No gene alias available
Parental gene description:
eukaryotic translation initiation factor 1 [Source:HGNC Symbol;Acc:3249]

Genomic region (view in browser)





>retro_mputfur_1299
ATGTCCACTCTCCAGACTTTGCACTCTTGTGATCCCTTTGCTGATGCAAGTAAGGGAAAT
GCTCTGCTTCCTGCTGGCATTGAAGGTTATATCCATGGAAGAATTCAACAGAGAAATGGC
AGAAGACCCTTACTACTGTCCAGAGACTTGCTGATGATTACAAGGAAAAGAAACTAGTGA
AGGTGTTTAAAAAGAAGTTTGCCTGCCATGGTGTTGTGCTTGAGCTTCCAGAATAGGGAG
ACGTAATTCACAGGATAACTAGCACAAGAATATAGGCCAGCTCCTCCCTTGCAGAGACTG
GACTGGCTAAGGACCAGCAGCTGGAGGTTTATGGG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MSAIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGR-KTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVE
MS..Q.LHS.DPFADASKG..LLPAG.E.YIH.RIQQRNGR.KTLTTVQ..ADDY..KKLVK.FKKKFAC.G.V.E.PE.G.VI......R......L.E
Retrocopy
MSTLQTLHSCDPFADASKGNALLPAGIEGYIHGRIQQRNGR/KTLTTVQRLADDYKEKKLVKVFKKKFACHGVVLELPE*GDVIHRITSTRI*ASSSLAE


Parental protein
IGLAKDDQLKVHG
.GLAKD.QL.V.G
Retrocopy
TGLAKDQQLEVYG


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide