RetrogeneDB ID:
retro_mputfur_13
Organism:
Location:
GL896900.1:9371266-9374524 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
97.05 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_13
ATGGATAACCCGGAAAATGTCTTTCAAATGTTTGAAGCCCATATGCAGAGCTACAAGGGC
GATGACCCACTTGGTGAATGGGAAAGTTACATGCAGTGGGTAGAAGAGAACTTTCCTGAA
AATAAGGAATACTTGACAACTTTATTAGAACATTTAATGAAAGAGTTTTTGGATAAGAAG
AAATACCACAATGACCCAAGATTCATAAATTGCTGTTTAAAATTTGCTCAGTACAACAGT
GATCTTCATCAGTTCTTTGAGTTTCTTTACAACCACGGGATTGGAACCTTGTCATCTCCT
CTCTACGTAGCCTGGGCAGGGCATCTGGAAGGCCAGGGAGAGCTGCAGCATGCCAGCGCT
GTTCTTCGGAGAGGACTTCAAAACCAGGCCGAACCAAGAGAGCTGCTGCAACAACACTAC
AGGTTATTCCAGGCACGCCTCACTGAAACGCATTTGCCAACTCAAGCTAGGACTTCAGAA
CCTCTCCATAATGCTCAGATTTTAAACCAAATGATGACTTCAAAATCAAATCCAGGAAAT
AACTCAGCTTGCATGTCTAAGAATCAGGGTTCAGAAGTTTCTGGGGTAGTATCTACAGTT
GGTGATAAAGAGTCAAAAAAGGAACAAAGGGTGATCGTGATTTCCAAATCAGAATATTCT
GCACAAGCATCTTCAGCAGCTAGAGCTGACATTCAGCAGGTTGTCATGTATTGCAAGGAG
AAGCTTATTCGCCGAGAATCAGAGTTTTCCTTTGAAGAGCTGAGAGCCCAGAAATACAAT
CAACGGAGAAAGCATGAACAGTGGGTGAATGAAGATAGACGTTATATGAAAAGAAAAGAA
GCAAATGCTTTTGAAGAACAACTATTAAAACAGAAGATGGATGAACTGCATAAGAAGTTG
CATCAGGTGGTGGAGACATTCCAGGAGAACTTGCCTGTTTTCCAGGAAAGGTCTGAGTTT
AATCCAGCATGTATGGGACCAAGTGTAAGCTCCCAGGAGGACCTGAGAGCCCCGTCTCTT
CCAGCTATCAATCATCAGACCTCAAAGAACATGGGAGAGAAACCCAGAGAGACAACTCCT
GTTGTTCCTCCTATGGCAAATGCTATCACTGCCACTTTGGTGTCCCCGGCCATCAGTCAG
AGTGTATCTCCTCCTGGTCCTTTGTCAGCCCAGTCAGACACAGACTCCATGTTTGCAGTG
ACCAGAAAAGATGACAGATGTGTGACTAAAAGTACTCGTGAATTCAAGCCACAGAGTGAA
GCCGAGATAAAAGAAGGATCTGAAACACATAAGGTTGTTAACACAGGCTTTTTTCACACA
ACTCCAAACACATCGTTGGGAATGGTTCAGGCGACCCCATCCAGGGTGCAGCCGTCACCC
ACCGTGCACACAAAGGAAGCATTAGGTTTCATCATGAATATGTTTCAGGCTCCTACACTT
CCTGATATTTCTGATGACAAAGATGAATGGCCATCTCTGGACCAAAATGAAGATGCTTTT
CAGGCCCAGTTTCAAAAAAATGCAAGGTCTTCTGGGGCTTGGGGAGTCAATAAGATCATC
TCTTCTTTGACATCTACTTTTCCTGTGTTCGAAGATGGAAACAAAGAAAATTATGGATTA
CCACAGCCTAAAAATAAACCTGCAGGAGCCAGGACATTTGAAGAACGCTCTGTAAGCAGA
TTTCCTTCAAAACCCAATGAAGTACCTCACGCTGAAGAGATTTTGGATGACTCAACCGTC
TGGGGTGTCTGCTGCAATAGAACCCTGGCGCCCAGTCCGAAGAGCCCAGGACACTTCACG
GCTGCCGCACAGCTTGCATCCACACCTTTCCACAAACCACCCGTGGACACAGGGCCTTCT
CTGGAGGATAAAGAAAATGTGGTTGCAAAAGAGTACGTCCATGTGACTCTGGATTCTTGT
GAAGAAAACATGGGAGAACCCTCAAAAGACAGAAAGTTCAGCTCAATTCAAGAGAAAACC
CCAGAACCAGCATTCCCTGCAGACATATCTTCAGCATCCTTGCTCCGTGGGAGCCAGCCT
GCAGCAGGTGGTGTGCTGGCCAGTGAGGTGGCACAGAGCCTCGAGGCTTGTAAACTCACA
GACACTAACCTCACCGTCACAGAAGATCCACCCGGCGCTGGTGCCGGGCACCAAGCAGAA
TGGACGCAGACTAGTTCATTTGAGAATGTCAACGCTTCAAACTTGACTGTTGAGAATCCA
TGGGATGATACATTGATTCTCAAACTTTTATCTGGGCTTTCTAAGCCAGTGAGATCCTAT
CCAAATACTTATGAATGGCAGTGTAAACTTCCAGCCATCAAGCCCAAGACTGAGTTTCAA
CTGGGTTCCTTGCTGGTCTATGTTGATCACCTTCTTGGAGAAGGGGCCTTTGCCCAGGTC
TATGAAGTTACCCATGGAGAGGTGAATGATATCAAAAATAAACAGAAATTCGTTTTAAAG
GTCCAAAAGCCCGCCAACCCCTGGGAGTTCTACATCGGGACCCAGCTGATGGAGAGACTG
AAGCCAAGCATGCGACACATGTTCATCAAATTCTATTCCGCCCACTTCTTCCAGAACGGC
AGTGTATTAGTAGGGGATCTCTACAGCTATGGCACGTTGCTAAATGCTATTAACCTCTAT
AAAAACACCCCAGAAAAAGTGATGCCACAAGCTCTGGTCCTGTCCTTCGCGATCAGAATG
CTCTGCATGATTCAGCAAGTGCACGACTGTGAGATAATTCACGGAGACATTAAGCCCGAC
AATTTCATACTGGGAAACAGATTTTTGGAACAGGATGGTGATGACGATGATGTATCTGCT
GGCTTGGCGCTGATTGACCTGGGTCAGAGTATAGACATGAAACTTTTTCCTAAAGGAACT
ACATTTACAGCAAAGTATGAGACCTCTGGTTTTCAGTGTATCGAGATGCTCAGCAACAAG
CCATGGAACTACCAGATTGACTACTTCGGAGTTGCTGCAACAGTGTACTGCATGCTTTTC
GGCACTTACATGAAAGTGAGAAATGAAGGAGGTGTCTGGAAGCCGGAAGGTCTTTTTAGG
AGGCTGCCTCATCTGGACATGTGGAGTGAGTTCTTTCACATCATGTTGAATATTCCCGAT
TGTCATCATCTTCCGTCTTTGGATTTGTTAAGACAAAAACTGAAGAAAATATTTCAACAA
CACTATACAAACAAGATTAAGACCCTACGTAACAGGCTGATCATACTGCTCTTAGAATAT
AAGCGTTCTCGAAAATAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MDNPENVFQMFEAHMQSYKGDDPLGEWESYMQWVEENFPENKEYLTTLLEHLMKEFLDKKKYHNDPRFINYCLKFAQYNSDLHQFFEFLYNHGIGTLSSP
MDNPENVFQMFEAHMQSYKGDDPLGEWESYMQWVEENFPENKEYLTTLLEHLMKEFLDKKKYHNDPRFIN.CLKFAQYNSDLHQFFEFLYNHGIGTLSSP
Retrocopy
MDNPENVFQMFEAHMQSYKGDDPLGEWESYMQWVEENFPENKEYLTTLLEHLMKEFLDKKKYHNDPRFINCCLKFAQYNSDLHQFFEFLYNHGIGTLSSP


Parental protein
LYVAWAGHLEGQGELQHASAVLRRGLQNQAEPRELLQQHYRLFQARLTETHLPTQARTSEPLHNAQILNQMMTSKSNPGNNSACMSKNQGSEVSGVVSSV
LYVAWAGHLEGQGELQHASAVLRRGLQNQAEPRELLQQHYRLFQARLTETHLPTQARTSEPLHNAQILNQMMTSKSNPGNNSACMSKNQGSEVSGVVS.V
Retrocopy
LYVAWAGHLEGQGELQHASAVLRRGLQNQAEPRELLQQHYRLFQARLTETHLPTQARTSEPLHNAQILNQMMTSKSNPGNNSACMSKNQGSEVSGVVSTV


Parental protein
GDKESKKEQRVIVISKSEYSAQASSAARADIQQVVMYCKEKLIRGESEFSFEELRAQKYNQRRKHEQWVNEDRHYMKRKEANAFEEQLLKQKMDELHKKL
GDKESKKEQRVIVISKSEYSAQASSAARADIQQVVMYCKEKLIR.ESEFSFEELRAQKYNQRRKHEQWVNEDR.YMKRKEANAFEEQLLKQKMDELHKKL
Retrocopy
GDKESKKEQRVIVISKSEYSAQASSAARADIQQVVMYCKEKLIRRESEFSFEELRAQKYNQRRKHEQWVNEDRRYMKRKEANAFEEQLLKQKMDELHKKL


Parental protein
HQVVETSQENLPVFQERSEFNPACMGPSVSSQEDLRAPSLPAINHQTSKNMGEKPRETTPVVPPMANAITATLVSPAISQSVSPPGPLAAQSDTDSMFAM
HQVVET.QENLPVFQERSEFNPACMGPSVSSQEDLRAPSLPAINHQTSKNMGEKPRETTPVVPPMANAITATLVSPAISQSVSPPGPL.AQSDTDSMFA.
Retrocopy
HQVVETFQENLPVFQERSEFNPACMGPSVSSQEDLRAPSLPAINHQTSKNMGEKPRETTPVVPPMANAITATLVSPAISQSVSPPGPLSAQSDTDSMFAV


Parental protein
TRKDDRCVTKSTHEFKPQSEAEIKEGSETHKVVNTGSFHTTPNTSLGMVQATPSRVQPSPTVHTKEALGFIMNMFQAPTLPDISDDKDEWPSLDQNEDAF
TRKDDRCVTKST.EFKPQSEAEIKEGSETHKVVNTG.FHTTPNTSLGMVQATPSRVQPSPTVHTKEALGFIMNMFQAPTLPDISDDKDEWPSLDQNEDAF
Retrocopy
TRKDDRCVTKSTREFKPQSEAEIKEGSETHKVVNTGFFHTTPNTSLGMVQATPSRVQPSPTVHTKEALGFIMNMFQAPTLPDISDDKDEWPSLDQNEDAF


Parental protein
EAQFQKNARSSGAWGVNKIISSLTSTFPVFEDGNKENYGLPQPKNKPAGARTFGERSVSRFPSKPNKEVPHAEEFLDDSTVWGVRCNRTLAPSPKSPGHF
.AQFQKNARSSGAWGVNKIISSLTSTFPVFEDGNKENYGLPQPKNKPAGARTF.ERSVSRFPSKPN.EVPHAEE.LDDSTVWGV.CNRTLAPSPKSPGHF
Retrocopy
QAQFQKNARSSGAWGVNKIISSLTSTFPVFEDGNKENYGLPQPKNKPAGARTFEERSVSRFPSKPN-EVPHAEEILDDSTVWGVCCNRTLAPSPKSPGHF


Parental protein
TAAAQLASTPFHKPPADTGPSLEDKENVVAKEYVHVTLDSCEENVGEPSKDRKFSSIQEKTPEAAFPADISSASLLRGSQPAAGGVLASEVAQSLEACKL
TAAAQLASTPFHKPP.DTGPSLEDKENVVAKEYVHVTLDSCEEN.GEPSKDRKFSSIQEKTPE.AFPADISSASLLRGSQPAAGGVLASEVAQSLEACKL
Retrocopy
TAAAQLASTPFHKPPVDTGPSLEDKENVVAKEYVHVTLDSCEENMGEPSKDRKFSSIQEKTPEPAFPADISSASLLRGSQPAAGGVLASEVAQSLEACKL


Parental protein
TDTNLTVAEDPPGAGAGHQAERTQTSSLENVNASNLTVENPWDDTLILKLLSELSKPVRSYPNTYEWQCKLPAIKPKTEFQLGSLLVYVDHLLGEGAFAQ
TDTNLTV.EDPPGAGAGHQAE.TQTSS.ENVNASNLTVENPWDDTLILKLLS.LSKPVRSYPNTYEWQCKLPAIKPKTEFQLGSLLVYVDHLLGEGAFAQ
Retrocopy
TDTNLTVTEDPPGAGAGHQAEWTQTSSFENVNASNLTVENPWDDTLILKLLSGLSKPVRSYPNTYEWQCKLPAIKPKTEFQLGSLLVYVDHLLGEGAFAQ


Parental protein
VYEVTHGEVNDIKNKQKFVLKQQSLACHHFFFFGTQLMERLKPSMRHMFIKFYSAHFFQNGSVLVGDLYSYGTLLNAINLYKNTPEKVMPQALVLSFAIR
VYEVTHGEVNDIKNKQKFVLK.Q..A....F..GTQLMERLKPSMRHMFIKFYSAHFFQNGSVLVGDLYSYGTLLNAINLYKNTPEKVMPQALVLSFAIR
Retrocopy
VYEVTHGEVNDIKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMRHMFIKFYSAHFFQNGSVLVGDLYSYGTLLNAINLYKNTPEKVMPQALVLSFAIR


Parental protein
MLCMIQQVHDCEIIHGDIKPDNFILGNRFLEQDGDDDDVSAGLALIDLGQSIDMKLFPKGTTFTAKCETSGFQCIEMLSNKPWNYQIDYFGVAATVYCML
MLCMIQQVHDCEIIHGDIKPDNFILGNRFLEQDGDDDDVSAGLALIDLGQSIDMKLFPKGTTFTAK.ETSGFQCIEMLSNKPWNYQIDYFGVAATVYCML
Retrocopy
MLCMIQQVHDCEIIHGDIKPDNFILGNRFLEQDGDDDDVSAGLALIDLGQSIDMKLFPKGTTFTAKYETSGFQCIEMLSNKPWNYQIDYFGVAATVYCML


Parental protein
FGTYMKVRNEGGVWKPEGLFRRLPHLDMWSEFFHIMLNIPDCHHLPSLDLLRQKLKKIFQQHYTNKIKTLRNRLIVLLLEYKRSRK
FGTYMKVRNEGGVWKPEGLFRRLPHLDMWSEFFHIMLNIPDCHHLPSLDLLRQKLKKIFQQHYTNKIKTLRNRLI.LLLEYKRSRK
Retrocopy
FGTYMKVRNEGGVWKPEGLFRRLPHLDMWSEFFHIMLNIPDCHHLPSLDLLRQKLKKIFQQHYTNKIKTLRNRLIILLLEYKRSRK


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide