RetrogeneDB ID:
retro_mputfur_130
Organism:
Location:
GL897089.1:480195-481551 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
96.01 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_130
ATGCGTGAGTGTATCTCCATCCACGTTGGCCAGGCTGGTGTCCAGATTGGCAATGCCTGC
TGGGAGCTCTATTGCCTGGAGCATGGCATTCAGCCCGATGGCCAGATGCCAAGTGACAAG
ACCATCGGGGGAGGAGACGACTCCTTCAACACCTTCTTCAGTGAGACTGGTGCTGGCAAG
CATGTGCCCCGGGCCATGTTTGTAGACCTGGGACCCACAGTCATTGATGAAGTTTGCACT
GGCACCTACCGCCAGCTCTTCCACCCTGAGCAGCTCATCACAGGCAAGGAAGATGCTGCC
AACAACTACGTCCAAGGGCACTACACCATTGGCAAAGAGATCATTGACCTTGTCTTGGAC
CGAATTCGGAAGCTGGCTGACCAGTGCACAGGTCTTCAGGGCTTCTTGGTTTTCCACAGC
TTTGGAGGGGGAACTGGTTCCGGGTTCACCTCCCTGCTGATGGAACGTCTCTCTGTCGAT
TATGGCAAGAAGTCCAAGCTGGAGTTCTCCATCTACCCAGCCCCTCAGGTTTCCACAGCT
GTAGTTGAGCCCTACAACTCCATCCTCACTACCCACACCACCCTGGAGCACTCTGATTGT
GCCTTCATGGTAGACAATGAGGCCATCTATGACATCTGTTGTAGAAACCTTGATATTGAA
CGCCCAACCTACACTAATCTAAATAGGTTGATAGGCCAGATTGTGTCCTCCATCACCGCT
TCCCTCAGATTTGATGGAGCCCTGAACGTTGATCTGACAGAATTCCAGACCAACCTGGTG
CCCTATCCCCGTATCCACTTCCCTCTGGCCACCTATGCCCCTGTCATCTCTGCTGAGAAA
GCCTACCATGAACAGCTTTCTGTAGCAGAGATCACCAACGCGTGCTTTGAGCCAGCCAAC
CAGATGGTGAAATGTGACCCTCGCCATGGTAAATACATGGCTTGCTGCCTGTTGTACCGT
GGCGATGTGGTTCCCAAAGATGTCAATGCTGCCATTGCCACCATCAAGACCAAGCGTACC
ATCCAGTTTGTGGACTGGTGCCCCACTGGCTTCAAAGTGGGCATTAATTACCAGCCTCCC
ACTGTGGTGCCCGGTGGAGACCTGGCCAAAGTCCAGCGAGCTGTGTGCATGCTGAGCAAC
ACCACAGCCATCGCTGAGGCCTGGGCTCGCCTGGACCACAAGTTTGACCTGATGTATGCC
AAGCGTGCCTTTGTTCACTGGTATGTGGGGGAAGACATGGAGGAAGGAGAGTTTTCTGAG
GCCCGTGAGGACATGGCTGCCCTTGAGAAGGATTATGAGGAGGTTGGTGTGGATTCTGTT
GAAGGAGAGGGTGAAGAAGAAGGAGAGGAATACTAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAA
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRA.FVDL.PTV.DEV.TGTYRQLFHPEQLITGKEDAA
Retrocopy
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAMFVDLGPTVIDEVCTGTYRQLFHPEQLITGKEDAA


Parental protein
NNYARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDC
NNY..GHYTIGKEI.DLVLDRIRKLAD.CTGLQGFL.FHSFGGGTGSGF.SLLMERLSVDYGKKSKLEF.IYPAPQVSTAVVEPYNSILTTHTTLEHSDC
Retrocopy
NNYVQGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDC


Parental protein
AFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
AFMVDNEAIYDIC.RNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
Retrocopy
AFMVDNEAIYDICCRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN


Parental protein
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYA
QMVKCDPRHGKYMACC.LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYA
Retrocopy
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYA


Parental protein
KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEAEA-EEGEEY
KRAFVHWYVGE.MEEGEFSEARED.AALEKDYEEVGVDSVE.E..EEGEEY
Retrocopy
KRAFVHWYVGEDMEEGEFSEAREDMAALEKDYEEVGVDSVEGEGEEEGEEY


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide