RetrogeneDB ID:
retro_mputfur_1305
Organism:
Location:
GL897075.1:2838977-2839202 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
65.33 %
Coverage:
61.48 %
Frameshifts:
0
Stop codons:
3


Parental gene:
Parental gene symbol:
Gm2178
Parental gene aliases:
No gene alias available
Parental gene description:
predicted gene 2178 [Source:MGI Symbol;Acc:MGI:3780348]

Genomic region (view in browser)





>retro_mputfur_1305
GAAGCACAAAAATCTGCATGTGGCTGGTGCCCAGGCCAACTTCGAGGAGTTTGTGCTGTG
AGACCTAAAGTTTGTATGAGATTGTCTCAAACAAAAATACACATCTGCAGGGCCTAAGGT
GGTTTCATGTGAGTCAAGTGTGTTCCTGACAGGATCAAGTGTGCTTTCCTTACTGATGAG
CAGAAACCCATTATGGAAGTGTAGAATGCCCAAGCAGAGTCAGAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
KAPKSACGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVLKAQAQSQ
.A.KSACG.CPG.LRGV.AVRPKV.MRLS.TK.H..RA.GG.M..KCV.DRIK.AFL..EQK....V..AQA.S.
Retrocopy
EAQKSACGWCPGQLRGVCAVRPKVCMRLSQTKIHICRA*GGFM*VKCVPDRIKCAFLTDEQKPIMEV*NAQAESE


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide