RetrogeneDB ID:
retro_mputfur_1307
Organism:
Location:
GL897076.1:1247899-1248160 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
81.61 %
Coverage:
63.97 %
Frameshifts:
0
Stop codons:
1


Parental gene:
Parental gene symbol:
RPL27
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein L27 [Source:HGNC Symbol;Acc:10328]

Genomic region (view in browser)





>retro_mputfur_1307
CCATACAAAGTGACAGCGGCCATGGGCAAGAAGAAAATCACCAAGAAGTCAAAGATCAAG
TCTTTCATGAAAGTTTACAACTACAGTCATCTCATGCCCACAAGGTATTCTGTGGATATC
CTCTTGGACAAAACTGTCCTCAAAAACGATGTCTTCAGAGATTCTGCTCTTAAACACAAG
GCTTGAAGAGAGGCGGAGGTCAAGTTCAAGGAGAGGTACAGGACCGGCAAGAACAAATGG
TTCTTCCCAAAGCTGCGGTTT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF
P.KVTAAMGKKKI.K.SKIKSF.KVYNY.HLMPTRYSVDI.LDKTV...DVFRD.ALK.KA.REA.VKF.ERY.TGKNKWFF.KLRF
Retrocopy
PYKVTAAMGKKKITKKSKIKSFMKVYNYSHLMPTRYSVDILLDKTVLKNDVFRDSALKHKA*REAEVKFKERYRTGKNKWFFPKLRF


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide