RetrogeneDB ID:
retro_mputfur_1309
Organism:
Location:
GL897076.1:3227059-3227284 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
73.33 %
Coverage:
66.96 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
SNRPF
Parental gene aliases:
No gene alias available
Parental gene description:
small nuclear ribonucleoprotein polypeptide F [Source:HGNC Symbol;Acc:11162]

Genomic region (view in browser)





>retro_mputfur_1309
CCTCAATCCCAAACTTCTTTCCTCAATGGGCTAACAGAAAAGGCAGTAGTGGGGAAACTT
CAGTGGGGAATGGGGTACAAAGGATACCTGGTACTTGTAGATGGTTCTATGAACATGCAC
CCTGAAAACACAGAAGAATACATAGATGGAGCACTGTCTGCACATTTGAGTGAGGTTCTT
ATAAGGCATAATAATGTCCTTTACATCAGGGGTATTGAAGAAGAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
PLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEVLIRCNNVLYIRGVEEE
P.....FLNGLT.K.V..KL.WGM.YKGYLV.VDG.MNM...NTEEYIDGALS.HL.EVLIR.NNVLYIRG.EEE
Retrocopy
PQSQTSFLNGLTEKAVVGKLQWGMGYKGYLVLVDGSMNMHPENTEEYIDGALSAHLSEVLIRHNNVLYIRGIEEE


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide