RetrogeneDB ID:
retro_mputfur_131
Organism:
Location:
GL896900.1:17550084-17551992 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
86.33 %
Coverage:
97.06 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
Heat shock cognate 71 kDa protein [Source:UniProtKB/TrEMBL;Acc:G9K4X7]

Genomic region (view in browser)





>retro_mputfur_131
ATGTCTGCCCGCGGCCCGGCTATCGGCATCGACCTGGGCACCACCTACTCGTGCGTGGGG
GTCTTCCAACATGGCAAGGTGGAGATCATCGCCAACGACCAGGGCAACCGCACCACCCCC
AGCTACGTGGCCTTCACCGACACCGAGCGCCTCATCGGCGACGCCGCCAAGAACCAGGTG
GCCATGAACCCCACCAACACCATCTTCGACGCCAAGAGGCTGATCGGACGGAAGTTCGAG
GACGCCACGGTGCAGTCGGACATGAAACACTGGCCGTTCCGGGTGGTGAGCGAGGGAGGG
AAGCCCAAGGTGCAGGTGGAATACAAGGGAGAGATCAAGACCTTCTTCCCAGAGGAAATC
TCCTCCATGGTCCTCACTAAGATGAAGGAGATCGCCGAAGCCTACCTGGGCGGCAAGGTG
CAGAGCGCGGTCATCACGGTCCCGGCCTATTTCAATGACTCGCAGCGCCAGGCCACCAAG
GACGCGGGCACCATCACGGGCCTCAACGTGCTGCGCATCATCAACGAGCCCACCGCGGCG
GCCATTGCCTACGGCCTGGACAAGAAGGGCTGCGCCGGCGGCGAGAAGAACGTGCTCATC
TTTGACCTGGGCGGCGGCACCTTCGACGTGTCCATCCTGACCATCGAGGATGGCATTTTC
GAGGTGAAGTCCACGGCCGGCGACACCCACCTGGGCGGCGAGGATTTCGACAACCGCATG
GTGAGCCACCTGGCGGAGGAGTTCAAGCGCAAGCACAAGAAGGACATTGGGCCCAACAAG
CGCGCAGTGCGCCGACTGCGCACCGCCTGCGAGCGAGCCAAGCGCACCTTGAGCTCGTCT
ACGCAGGCGAGCATCGAGATCGACTCGCTATACGAGGGCGTGGACTTCTACACGTCCATC
ACTCGCGCCCGCTTCGAGGAGCTGAACGCTGACCTGTTTCGCGGAACCCTGGAGCCGGTG
GAGAAGGCGCTGCGTGACGCCAAGCTGGACAAGGGCCAGATCCAGGAGATCGTGCTGGTG
GGCGGCTCCACCCGAATCCCCAAGATCCAGAAGCTGTTGCAGGATTTCTTCAACGGCAAG
GAGCTGAACAAGAGCATCAACCCCGACGAGGCGGTGGCCTACGGAGCTGCGGTGCAGGCG
GCCATCCTCATCGGAGACAAGTCAGAGAACGTGCAGGACCTGCTGCTGCTCGACGTGACC
CCGTTGTCGCTGGGCATTGAGACGGCTGGCGGCGTCATGACCCCACTCATCAAGAGAAAC
ACCACGATCCCTACCAAGCAGACGCAGACCTTCACCACCTACTCGGACAACCAGAGCAGC
GTGCTGGTGCAGGTGTATGAGGGCGAACGGGCCATGACCAAGGACAATAACCTGCTGGGC
AAGTTCGACCTGACCGGGATTCCCCCGGCGCCCCGCGGGGTCCCTCAGATCGAGGTCACC
TTCGATATAGACGCCAATGGCATCCTTAACGTCACCGCCGCCGACAAGAGTACCGGTAAA
GAAAACAAAATCACCATTACCAACGACAAGGGTCGTCTGAGCAAGGACGACATTGACCGG
ATGGTCCAGGAGGCAGAGCGGTACAAGTCGGAAGATGAGGCCAATCGCGACCGGGTCGCT
GCCAAAAACGCGGTGGAGTCCTATACCTACAACATCAAGCAGACGGTGGAAGACGAGAAA
CTGAGGGGCAAGATTAGCGAGCAGGACAAAAACAAGATCCTCGACAAGTGTCAGGAGGTG
ATCAACTGGCTCGACCGAAACCAGATGGCAGAGAAAGATGAGTATGAACACAAGCAGAAA
GAGCTTGAAAGAGTGTGCAACCCCATCATCAGCAAACTTTACCAAGGTGGCCCTGGCGGC
GGCGGTTCTGGAGCCTCCGGGGGACCGACCATCGAGGAAGTGGACTAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRP
..GPA.GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNT.FDAKRLIGR.F.DA.VQSDMKHWPF.VV...G.P
Retrocopy
ARGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKP


Parental protein
KVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKK--VGAERNVLIFD
KVQVEYKGE.K.F.PEE.SSMVLTKMKEIAEAYLG..V..AV.TVPAYFNDSQRQATKDAGTI.GLNVLRIINEPTAAAIAYGLDKK...G.E.NVLIFD
Retrocopy
KVQVEYKGEIKTFFPEEISSMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFD


Parental protein
LGGGTFDVSILTIEDGIFEVKSTAGDSHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKCTLSSSTQASIEIDSLYEGIDFYTSITR
LGGGTFDVSILTIEDGIFEVKSTAGD.HLGGEDFDNRMV.H...EFKRKHKKDI..NKRAVRRLRTACERAK.TLSSSTQASIEIDSLYEG.DFYTSITR
Retrocopy
LGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITR


Parental protein
ARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPL
ARFEELNADLFRGTL.PVEKALRDAKLDK.QI..IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAIL.GDKSENVQDLLLLDVTPL
Retrocopy
ARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDLLLLDVTPL


Parental protein
SLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKEN
SLGIETAGGVMT.LIKRNTTIPTKQTQTFTTYSDNQ..VL.QVYEGERAMTKDNNLLGKF.LTGIPPAPRGVPQIEVTFDIDANGILNV.A.DKSTGKEN
Retrocopy
SLGIETAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAADKSTGKEN


Parental protein
KITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKEL
KITITNDKGRLSK.DI.RMVQEAE.YK.EDE..RD.V..KN..ESY..N.K.TVEDEKL.GKI...DK.KILDKC.E.INWLD.NQ.AEK.E.EH.QKEL
Retrocopy
KITITNDKGRLSKDDIDRMVQEAERYKSEDEANRDRVAAKNAVESYTYNIKQTVEDEKLRGKISEQDKNKILDKCQEVINWLDRNQMAEKDEYEHKQKEL


Parental protein
EKVCNPIITKLYQSAGGMPGGMPGGFPGG
E.VCNPII.KLYQ...G.PGG...G..GG
Retrocopy
ERVCNPIISKLYQ---GGPGGGGSGASGG


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide