RetrogeneDB ID:
retro_mputfur_1311
Organism:
Location:
GL897077.1:238624-239222 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
76.24 %
Coverage:
71.33 %
Frameshifts:
3
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1311
GAGAGAACCTGGGAGATGCTTCTGCAGGCAGCTTGTGCCATTGTTGCCATTGAAAACCCA
GTTGATATCAGTGTTCTGTCATCCAGAAATACTAGCCAGCAAGCTGTGCTGAAGTTTGCT
GCTGCTACTGGAGCCACTCCCTCCTGCTGGCCACTTTATCCCTGGAACCTTCAATAACCA
GATCTAGGCAGCCTTCCTAGAGCCAAGCCTTCTTGGTGGTTACTGATGCTAGGACTGACC
ACAGCCTCACACAGAGGTGTCTTACGTTAACCTGCCTACGGTCGCTCTGTGTAACACAGA
CTCTCCTCTGCACTCTATGCACATTACTATCCCTTACAGCAATAAGGGAGCTCACTCAGT
GAGTCTAATGTGGCGGAGCCTGGCCTGGGAAGTTCTGTCCGTGCGTGGCACCATTTCCCA
TGAACACCCGTGTGAGGTCATGCCTTATCTCTACTACTACAGAGATCCTGAAGAGATTGA
AAAGGAAGAGCAGGCCGCTGCTGAAAAGGCTGTGACCAAGGAAGACTTTCAGGGTGAATG
GACTGCTCCAGCTCCTGACTTCACTGCAGTTCATCCTGAAGTCACAAACTGGTCACAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
KRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPI-AGRFTPGTFTNQIQAAFREPRL-LVVTDPRADH-QPLTEASYVNLPTIALC
.RTWE.LL.AA.AIVAIENP.D.SV.SSRNT.Q.AVLKFAAATGATP..AG.F.PGTF.NQI.AAF.EP.L.LVVTD.R.DH.QP.TE.SYVNLPT.ALC
Retrocopy
ERTWEMLLQAACAIVAIENPVDISVLSSRNTSQQAVLKFAAATGATPS\AGHFIPGTFNNQI*AAFLEPSL\LVVTDARTDH/QPHTEVSYVNLPTVALC


Parental protein
NTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTATQPEVADW
NTDSPL....I.IP..NKGAHSV.LMW..LA.EVL..RGTIS.EHP.EVMP.LY.YRDPEEIEKEEQAAAEKAVTKE.FQGEWTAPAP.FTA..PEV..W
Retrocopy
NTDSPLHSMHITIPYSNKGAHSVSLMWRSLAWEVLSVRGTISHEHPCEVMPYLYYYRDPEEIEKEEQAAAEKAVTKEDFQGEWTAPAPDFTAVHPEVTNW


Parental protein
SE
S.
Retrocopy
SQ


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide