RetrogeneDB ID:
retro_mputfur_1323
Organism:
Location:
GL897081.1:2020924-2021374 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
79.35 %
Coverage:
92.77 %
Frameshifts:
0
Stop codons:
2


Parental gene:
Parental gene symbol:
METTL9
Parental gene aliases:
No gene alias available
Parental gene description:
methyltransferase like 9 [Source:HGNC Symbol;Acc:24586]

Genomic region (view in browser)





>retro_mputfur_1323
TTAGGTGCTGGAGATGAAGTCAGAAAAATCATGAACCCTCATTTTGAAGAAATATATGCT
ACTGAGTTCTCTGAAACTATGATATGGCAGCTTCAGAAAAAGAAATACAGAGTTCTTGGT
ATAAATGAATAGCAGAATACAGGGTTCCACTATGATATAAGTTGCTTAAATGTGCTGGAT
CAGCCCCTGACTGTGTTGAAAGATACCAGAAATGTCTTGGAAGCAATGAGAGACAGGGTC
ATCCTTGTTCGGGTTTTACCCTTTCATCCCTATGTGGAAAACATAGGTGGCAAGTGGGAG
GGACCTTCAGAAATTTTAGAAACCAAGAGATAGAATTGGGATGAACAAGTCAGTAGCTTG
CTTGAAGTTTTCAGAAAAGCTGGTTTTGTTACCAGAGCTTTCACCAGACTGCCATACCTG
TGTGAAGACGACATGTGTAATGACTACTAC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MGAGDGEVTKIMSPHFEEIYATELSETMIWQLQKKKYRVLGINEWQNTGFQYDVISCLNLLDRCDQPLTLLKDIRSVLEPTRGRVILALVLPFHPYVEN-
.GAGD.EV.KIM.PHFEEIYATE.SETMIWQLQKKKYRVLGINE.QNTGF.YD.ISCLN.L...DQPLT.LKD.R.VLE..R.RVIL..VLPFHPYVEN.
Retrocopy
LGAGD-EVRKIMNPHFEEIYATEFSETMIWQLQKKKYRVLGINE*QNTGFHYD-ISCLNVL---DQPLTVLKDTRNVLEAMRDRVILVRVLPFHPYVENI


Parental protein
GGKWEKPSEILEIKGQNWEEQVNSLPEVFRKAGFVIEAFTRLPYLCEGDMYNDYY
GGKWE.PSEILE.K..NW.EQV.SL.EVFRKAGFV..AFTRLPYLCE.DM.NDYY
Retrocopy
GGKWEGPSEILETKR*NWDEQVSSLLEVFRKAGFVTRAFTRLPYLCEDDMCNDYY


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide