RetrogeneDB ID:
retro_mputfur_1325
Organism:
Location:
GL897082.1:3008287-3008944 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
96.35 %
Coverage:
83.27 %
Frameshifts:
0
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1325
ATCATTTTCTTAAGGAACAGACTTAAGTATGCCCTAACAGGAGATGAAGTAAAGAAGATC
TGTATGCAGCGTTTTATTAAGATTGATGGCAAGGTCCGAACTGATATAACATACTCTGCT
GGTTTTATGGATGTCATCAGCATTGACAAGACCGGAGAGAATTTCCGTCTGATCTATGAT
GCCAAGGGTCGCTTTGCTGTTCTTTGGATTACACTCGATGAGGCCAAGTACAAGTTGTGC
AAAGTGAGAAAGATTTTTGTGGGGACAAAAGGCATCCCCCATCTGGTGACTCACGATGCT
CGCACCATCCGCTATCCTGATCCCCTCATCAAGGTCAATGACACCATTCAGATTGATTTG
GAAACTGGAAAGATTACTGATTTCATCAAGTTTGACACTGGTAATCTGTGTATGGTGACT
GGGGGTGCTAACCTGGGAAGAATTGGTGTGATCACCAACAGAGAGAGACACCCTGGTTCG
TTTGATGTGGTTCACGTGAAAGATGCCAGTGGCAACAGTTTTGCCACCTGACTCTCCAAC
ATTTTTGTTATTGGCAAAGGCAACAAACCATGGATTTCTCTTCCCCGTGGAAAGGGTATC
CGCCTCACCATTGCTGAAGAGAGAGACAAGAGACTGGCGGCCAAACAGAGCAGCGGG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
IIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITLEEAKYKLCKVRKIFVGTKGIPHLVTHDA
IIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITY.AGFMDVISIDKTGENFRLIYD.KGRFAV..ITL.EAKYKLCKVRKIFVGTKGIPHLVTHDA
Retrocopy
IIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYSAGFMDVISIDKTGENFRLIYDAKGRFAVLWITLDEAKYKLCKVRKIFVGTKGIPHLVTHDA


Parental protein
RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFAPRLSNIFVIGKGNKPWISLPRGKGI
RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDA.GNSFA..LSNIFVIGKGNKPWISLPRGKGI
Retrocopy
RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDASGNSFAT*LSNIFVIGKGNKPWISLPRGKGI


Parental protein
RLTIAEERDKRLAAKQSSG
RLTIAEERDKRLAAKQSSG
Retrocopy
RLTIAEERDKRLAAKQSSG


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide