RetrogeneDB ID:
retro_mputfur_1327
Organism:
Location:
GL897082.1:3540902-3541135 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
60.0 %
Coverage:
69.3 %
Frameshifts:
1
Stop codons:
0


Parental gene:
Parental gene symbol:
PPDPF
Parental gene aliases:
No gene alias available
Parental gene description:
pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish) [Source:HGNC Symbol;Acc:16142]

Genomic region (view in browser)





>retro_mputfur_1327
ATGTCAGCCATCCCCTCCCACAGCTCACTTGTGGCCTATGGCTGTTGCCCACACAGTGTG
GGCTCCACTTCCACTAAGAGCCCCTGCCGAAGTCCAGAGTCCCCTGGGGAAGCCATCCCT
CACCACCCCAGTCTCCCCAGGCCGACCCAGGCCACTGGTGGGCAAACTTCAGTTGGGGCA
AGTCCACTCTTCCATTCATAGCTACAGTGTTGGAGAGTCCCCAGGACACTCAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAAIPSSGSLVATHDYYRRRLGSTSSSSSCGSAECAGEAIPHPPGLPK-ADPGHWWASFFFGKSTVPFMATVLESPERSE
M.AIPS..SLVA.........GSTS..S.C.S.E..GEAIPH.P.LP..ADPGHWWA.F..GKST.PF.ATVLESP....
Retrocopy
MSAIPSHSSLVA-YGCCPHSVGSTSTKSPCRSPESPGEAIPHHPSLPR/ADPGHWWANFSWGKSTLPFIATVLESPQDTQ


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide