RetrogeneDB ID:
retro_mputfur_1333
Organism:
Location:
GL897084.1:1620157-1620631 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
76.54 %
Coverage:
66.39 %
Frameshifts:
0
Stop codons:
1


Parental gene:
Parental gene symbol:
C14orf166
Parental gene aliases:
No gene alias available
Parental gene description:
chromosome 14 open reading frame 166 [Source:HGNC Symbol;Acc:23169]

Genomic region (view in browser)





>retro_mputfur_1333
ATGTTCCAAGGCAAGCTTATGGCCCTCGACTACCACAACCCTGCTGGCTTCAACCACGAA
GATGAACCAGAATTTAGAAACTTGATTGTTTGGCTCGAAGACCAGAAAATCAGACAGTAC
AAGATTGAAGGCGGAGGTAATTGAAGAAATATCCACAGTAGTGACTGGCCCAAGTTCTTT
GAAAAATATCTCAGAGACGTTAACTGTCCTTTCAAGATTCAAGATGGGCAAGAAACAATT
GACCGGGTTCTTGGTTTAGCTGTAGGACTTGAGTCTGGAGATAATGCTGAAACATACAAG
GACTTGGGACTTGATAATACAAAAAATGCCAGTGGTGTAGAGGCATTGATCCATTTGGAT
GTAAATAATCCTGACTTTAAGGTTGCTGTAATGGCCTTGGGTAACCTTCTGAAGATTCCC
CGTCAGGATGGCTACCTGGTAATGCTTAAGGCAATTCGCATTTTGGTTCAGGAT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MFRRKLTALDYHNPAGFNCKDETEFRNFIVWLEDQKIRHYKIEDRGNLRNIHSSDWPKFFEKYLKDVNCPFKIQDRQEAIDWLLGLAVRLEYGDNAEKYK
MF..KL.ALDYHNPAGFN..DE.EFRN.IVWLEDQKIR.YKIE..GN.RNIHSSDWPKFFEKYL.DVNCPFKIQD.QE.ID..LGLAV.LE.GDNAE.YK
Retrocopy
MFQGKLMALDYHNPAGFNHEDEPEFRNLIVWLEDQKIRQYKIEGGGN*RNIHSSDWPKFFEKYLRDVNCPFKIQDGQETIDRVLGLAVGLESGDNAETYK


Parental protein
DLVPDNTKNADNAAKNAEPLINLDVNNPDFKAGVMALANLLQIQRHDDYLVMLKAIRILVQE
DL..DNTKNA.......E.LI.LDVNNPDFK..VMAL.NLL.I.R.D.YLVMLKAIRILVQ.
Retrocopy
DLGLDNTKNA----SGVEALIHLDVNNPDFKVAVMALGNLLKIPRQDGYLVMLKAIRILVQD


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide