RetrogeneDB ID:
retro_mputfur_1335
Organism:
Location:
GL897086.1:1888657-1889161 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
60.69 %
Coverage:
96.0 %
Frameshifts:
3
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1335
AGTTACTGCACCAACGTGCAGGCTGTCATTAACTACCTGGTCAACCTGCGTCTGTGGGCC
TCCGACACCTACCTCCCTCTGGGCTTCTCTTTCCACCTCGACAATGTGGCTCTGGAGGGG
GTGGGTCACTTCTGTGAGTTCACTGAGGAGAAACGCAAAGGTACCGAGCATCTCTTGAAG
GTGCAATACCAGCCCAGCAGCTGCGTCCTCCTCCAAAACATTCAAAAGCCTTCCCAGGAT
GAGTGGAGTAAAACTCTAGTGCCGCAGAAGCCACGGTAGTTCTGGAGAAGACGCTGAACC
AGGCCCTTTTGGAGCTGAAAGCCCTGCGTTCTGCCCAAGAGGCTCCCAGCTTGGGGACTT
CCTGGTGAACCACTTCCCAGATGAGGAGGTGAAACTCATCTAGAAGATGGAGACCACCTG
ACTCACCTTGTGGTTCTGCTGCCCCGCCCCTCCCCCACTGGGCTGGGCTCCTATCTCTTT
GAAAGGCTCACCCACAAGCACAAC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
NYSTEVEAAVNRLVNMHLRASYTYLSLGFYFDRDDVALEGVGHFFRELAEEKREGAERLLKMQNQRGGRALFQDVQKPSQDEWGKTL-DAMEAALVLEKS
.Y.T.V.A..N.LVN..L.AS.TYL.LGF.F..D.VALEGVGHF..E..EEKR.G.E.LLK.Q.Q.....L.Q..QKPSQDEW.KTL..A.EA..VLEK.
Retrocopy
SYCTNVQAVINYLVNLRLWASDTYLPLGFSFHLDNVALEGVGHFC-EFTEEKRKGTEHLLKVQYQPSSCVLLQNIQKPSQDEWSKTL/SAAEATVVLEKT


Parental protein
LNQALLDLHALGSARTDP-HLCDFLENHFLDEEVKLIKKM-GDHLTNLRRLAGPQAGLG--EYLFERLTLKHD
LNQALL.L.AL.SA...P..L.DFL.NHF.DEEVKLI.KM.GDHLT.L..L.......G...YLFERLT.KH.
Retrocopy
LNQALLELKALRSAQEAP/QLGDFLVNHFPDEEVKLI*KM/GDHLTHLVVLLPRPSPTGLGSYLFERLTHKHN


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide