RetrogeneDB ID:
retro_mputfur_1337
Organism:
Location:
GL897086.1:3549680-3550064 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
64.06 %
Coverage:
94.81 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
Histidine triad nucleotide binding protein 1 [Source:UniProtKB/TrEMBL;Acc:G9K4C0]

Genomic region (view in browser)





>retro_mputfur_1337
GGGCAGCCACACAGGAGAAAGGCCAAGATAGCAGATGATTTTGCTAAGACTCAGGCCAGG
TGGACTGGCAAAGACATAGTGTTCAGGAAGACCATTCACAAGGAAATCCCAGCCAAAATC
ATTTTTGAGGATGACCAGTATCTTGCTTTCCATGACCTTCCCCCTCATATACCAAAACGT
TTTCTGGTGACTCCAGAGAAGCATATATCCCAGATTCCTATAGCAGAGGGTGATGACAAA
AGTCTTCTTAGACATTTAATGATGGTTGGCAAGAAATGTGCTGCTGATCTGGGCCCTAAG
AAGGGTTATCGAGTAGCGGTGAATGAAGGTTCAGATGGGGACCAGTCTGTCATTTTCATC
TCCATGTTCTTGGAGGTTGGCAGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
GRPRGREAEMADEIAKAQAARPGGDTIFGKIIRKEIPAKIIFEDDQCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDESLLGHLMIVGKKCAADLGLK
G.P..R.A..AD..AK.QA...G.D..F.K.I.KEIPAKIIFEDDQ.LAFHD..P..P..FLV.P.KHISQI..AE.DD.SLL.HLM.VGKKCAADLG.K
Retrocopy
GQPHRRKAKIADDFAKTQARWTGKDIVFRKTIHKEIPAKIIFEDDQYLAFHDLPPHIPKRFLVTPEKHISQIPIAEGDDKSLLRHLMMVGKKCAADLGPK


Parental protein
KGYRMVVNEGSDGGQSVYHVHLHVLGGR
KGYR..VNEGSDG.QSV.........GR
Retrocopy
KGYRVAVNEGSDGDQSVIFISMFLEVGR


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide