RetrogeneDB ID:
retro_mputfur_1357
Organism:
Location:
GL897094.1:1332426-1332713 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
51.55 %
Coverage:
57.14 %
Frameshifts:
1
Stop codons:
0


Parental gene:
Parental gene symbol:
NME1
Parental gene aliases:
No gene alias available
Parental gene description:
NME/NM23 nucleoside diphosphate kinase 1 [Source:HGNC Symbol;Acc:7849]

Genomic region (view in browser)





>retro_mputfur_1357
AGACCTGCAGCTAGCAGTCAGGGCATCTTCATCACCACCAAACCTGTTAAAGCCTATCGG
GTCTTATGAAAAAGACCATCAAGCATTTTCAGCAGAAGGGATCCCACCATGTTGGTCTGA
AATTCATGCAGACTTCTGAAGACTTTCTCAAAGAACACTACATTGACCTGAAGGACCATC
CATTCTCTGCGGGTCTGATGAAACACACGCGCACAGGGCTAGGGATTGTCATGATGTGGG
AGAGACTGTGTGTTGTGAAAACAAATCAAGTGATGTTCCAAGAGACG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
RTMASCERTFIAIKPDGVQR-SLVGEIIKRFEQKGFRLVAMKLIQASEDLLKEHYIDLKDRPFFAGLVKYMQSGPVVAMVWEGLNVVKTGRVMLGET
R..AS....FI..KP....R..L....IK.F.QKG...V..K..Q.SED.LKEHYIDLKD.PF.AGL.K....G....M.WE.L.VVKT..VM..ET
Retrocopy
RPAASSQGIFITTKPVKAYR/GLMKKTIKHFQQKGSHHVGLKFMQTSEDFLKEHYIDLKDHPFSAGLMKHTRTGLGIVMMWERLCVVKTNQVMFQET


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide