RetrogeneDB ID:
retro_mputfur_1358
Organism:
Location:
GL897095.1:3295259-3295862 (+)
Status:
KNOWN_PSEUDOGENE
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
96.52 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
Pttg1
Parental gene aliases:
No gene alias available
Parental gene description:
pituitary tumor-transforming gene 1 [Source:MGI Symbol;Acc:MGI:1353578]

Genomic region (view in browser)





>retro_mputfur_1358
ATGGCTACCCTGATCTTTGTTGATAAGGAAAATGGAGAACCAGGCACCCGTGTGGCTCCC
AAGGATGGGCTGAAGCTGGGGTCGAGGCCTCCCGTCAAAGCTTTAGATGGGAGATCTCAG
GTTTCAACACCACGGGTAGGCAAAATGTTTGATGCTCAAGCAGCCGTACCTAGAGTTGCC
AGAAAGGCTTTGGGAACTGTCAACAGAGCCACAGAAAATTCAGTAAAGACTAGTGGACCT
CTCAAACAGAAGCAGCCAACCTTCTCTGCCAAAAAGGTGACTGAGAAGACTGTCAAAGCA
AAAAACTCTGTTCCTGCCTCTGATGACACCTACCCAGAAATAGAAAAATTCTTTCCCTTC
AATCCTTTAGATTTTGAGAGTTTCGACCTGCCTGAAGAACACCAGATTGCACACCTCCCC
TTGAATGGAGTGCCTCTCATGATCCTTGATGAGGAGAGGGAGCTTGAAAAGCTGTTACAC
CTGGGCCCCCCTTCACCTCTGAAGATACCCTCTCCACCATGGAAGTCTAATCTGTTGCAG
TCTCCAAATGTTCTGTCGACCCTGGATGTTGAATTGCCACCTGTTTGCTATGACTTAGAT
ATT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MATLIFVDKENGEPSTRVPPKDGLKLGSRPSVKALDGRSQVSTPRVGKMFDTQAAVPRVARKALGTVNRATENSVKTSGPLKQKQPTFSAKKVTEKTVKA
MATLIFVDKENGEP.TRV.PKDGLKLGSRP.VKALDGRSQVSTPRVGKMFD.QAAVPRVARKALGTVNRATENSVKTSGPLKQKQPTFSAKKVTEKTVKA
Retrocopy
MATLIFVDKENGEPGTRVAPKDGLKLGSRPPVKALDGRSQVSTPRVGKMFDAQAAVPRVARKALGTVNRATENSVKTSGPLKQKQPTFSAKKVTEKTVKA


Parental protein
KSSVPASDDTYPEIEKFFPFNPLDFESFDLPEEHQIAHLPLNGVPLMILDEERELEKLLHLGPPSPLKIPSPPWESNLLQSPSVLSTLDVELPPVCYDLD
K.SVPASDDTYPEIEKFFPFNPLDFESFDLPEEHQIAHLPLNGVPLMILDEERELEKLLHLGPPSPLKIPSPPW.SNLLQSP.VLSTLDVELPPVCYDLD
Retrocopy
KNSVPASDDTYPEIEKFFPFNPLDFESFDLPEEHQIAHLPLNGVPLMILDEERELEKLLHLGPPSPLKIPSPPWKSNLLQSPNVLSTLDVELPPVCYDLD


Parental protein
I
I
Retrocopy
I


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide