RetrogeneDB ID:
retro_mputfur_1359
Organism:
Location:
GL897095.1:780545-780973 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
78.91 %
Coverage:
54.55 %
Frameshifts:
3
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1359
TTTTGTTTCATCACTAAACAGATGAAGAGCCAGTAAAGAAATTGTTAGAGTGCAGATTAT
CACCAAATTGGTTCTGGGAAGTGTGAAACCAAGTTGCACAACACAAAGAGGTATATAGGC
AGCAAAAGCAACAACAAAAAGGAGGAAGAGGTGCCACAGCTGGTGGACCAGATGGTAGTA
GGGGTTGTGGACGAAATCAGGACCAAAACTGGAACCAAGGATCTAATAACTATTATGATC
AAGAATATGGAAATTACAACAGTGCCTATGGTGGGGATCAAAGCTATAGGGACTATCACG
GCTATGATTATAATGGGTATAACTATGGGAACTATGGATGTGGACAGGGATATGCAGACC
ACAGACCACAGAGCACTTATGGCAAGGCCTCTCGAGGGGTTGGCAGTCACCAAAATAAGT
GCCAACCA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
FCFITY-TDEEPVKKLLESR-YHQIGSGKCEIK-VAQPKEVYRQQQQQQKGGRGAAAGGRGGTRGRGRGQGQNWNQGFNNYYDQGYGNYNSAYGGDQNYS
FCFIT..TDEEPVKKLLE.R.YHQIGSGKCE.K.VAQ.KEVYRQQ.QQQKGGRGA.AGG..G.RG.GR.Q.QNWNQG.NNYYDQ.YGNYNSAYGGDQ.Y.
Retrocopy
FCFITK/TDEEPVKKLLECR\YHQIGSGKCETK/VAQHKEVYRQQKQQQKGGRGATAGGPDGSRGCGRNQDQNWNQGSNNYYDQEYGNYNSAYGGDQSYR


Parental protein
GYGGYDYTGYNYGNYGYGQGYADYSGQQSTYGKASRGGGNHQNNYQP
.Y.GYDY.GYNYGNYG.GQGYAD....QSTYGKASRG.G.HQN..QP
Retrocopy
DYHGYDYNGYNYGNYGCGQGYADHR-PQSTYGKASRGVGSHQNKCQP


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide