RetrogeneDB ID:
retro_mputfur_1362
Organism:
Location:
GL897097.1:1409755-1410126 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
80.0 %
Coverage:
84.51 %
Frameshifts:
2
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1362
TCTAGCCTGAGGAAGACCCGGAAACTTTGGGCCCACGTGAGCCATGGCCACGGCGGCATC
CACAAGCACCGGAAGCACCCAGGAGGCCAGGATAATGCTGGTGGCCTGTATTACCATAGG
ATCTTAGGATTATACTTCGAAAAATATCACCCAGGTTACTTTGGAAAAGTCGGTATGAGA
CATTACCACTTAAAGAGAAACCAGAGCTTCTGCCCAACTGTCAACCTTGATAAACTGTGG
ACCTTGGTCAGTGAGCAGACACAGGTAAATGCCACCAAAAACAAGACTGGAGTTGCTCCT
ATCATTGATGTGATGCGATTGGGCTACTACAAAAAGTTTTGTGAAAGGGAAAACTCCCAA
AACAGCCTGTC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
SRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRI---NFDKYHPGYFGKVGMRHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAP
S.LRKTRKL..HVSHGHG.I.KHRKHPGG..NAGG...HRI....F.KYHPGYFGKVGMRHYHLKRNQSFCPTVNLDKLWTLVSEQT.VNA.KNKTG.AP
Retrocopy
SSLRKTRKLWAHVSHGHGGIHKHRKHPGGQDNAGGLYYHRILGLYFEKYHPGYFGKVGMRHYHLKRNQSFCPTVNLDKLWTLVSEQTQVNATKNKTGVAP


Parental protein
IIDVVRSGYY-KVLGKGK-LPKQPV
IIDV.R.GYY.K...KGK.LPKQPV
Retrocopy
IIDVMRLGYY\KSFVKGK\LPKQPV


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide