RetrogeneDB ID:
retro_mputfur_1366
Organism:
Location:
GL897097.1:1494497-1494801 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
66.35 %
Coverage:
87.29 %
Frameshifts:
1
Stop codons:
2


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1366
GCTTTTAAAGACACTGGGAAGGCCCCTGTGGAACCCGAGGTGGTGATTCATCAAATTAGA
TCTGATCGGCCACAGCCTAAGTACTTGGAGAACGTGTGCGCTGACTTGATCAGAGGTTTA
AAGGAAAAGAATCTCAAGGTGAAAGGACCAGTTCTGGTGCCCATCAAGACTCTAAGAATC
ACTGCAAGAAAAATTTTCTTGTGGTGAAGATTCTAAGATTTGGGATTGTTTTCAGATGAG
GATCTACAAGTGACTCATTGATTTGTACAGTCTTTGTGAGATTGTTAGGTTACTTTGATC
AGTA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
AFKDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITTRKT-PCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQ
AFKDTGK.PVEPEV.IH...I.......K.LE.VCADLIRG.KEKNLKVKGPV..P.KTLRIT.RK...CGE.SK.WD.FQMRI.K.LIDL.S..EIV..
Retrocopy
AFKDTGKAPVEPEVVIHQ--IRSDRPQPKYLENVCADLIRGLKEKNLKVKGPVLVPIKTLRITARKI\SCGEDSKIWDCFQMRIYK*LIDLYSLCEIVRL


Parental protein
ITSI
..S.
Retrocopy
L*SV


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide