RetrogeneDB ID:
retro_mputfur_1369
Organism:
Location:
GL897098.1:2188875-2189154 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
64.89 %
Coverage:
57.67 %
Frameshifts:
0
Stop codons:
1


Parental gene:
Parental gene symbol:
ARL2BP
Parental gene aliases:
No gene alias available
Parental gene description:
ADP-ribosylation factor-like 2 binding protein [Source:HGNC Symbol;Acc:17146]

Genomic region (view in browser)





>retro_mputfur_1369
ACTATCTCTTCCGTCTCTGAAGCCGAATTTGATGCTAAGGTTGGATTTATGGAGGACGTT
GTCATGGATGGAGAGTTCTACGTACTGCTGAGAAGTTTCATGGACAAATAATACCAGGAA
TTTGAAGACACAGAAGAGTATAGACGCCTACGCACCAATTTTGACGAATACCTCTCTTTG
GTAGAAAAGTATACTGAAGAACAGCTGCTGACGCGGGTTCCCAGATTCAACATGGCGGCT
CCCATAGCAACAGGAAAGCACCACAAAGATGAGGTGGCT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
SFSSASDAEFDAVVGYLEDIIMDDEFQLLQRNFMDKYYQEFEDTEENKLTYTPIFNEYISLVEKYIEEQLLERIPGFNMAAFTTTLQHHKDEVA
..SS.S.AEFDA.VG..ED..MD.EF..L.R.FMDK.YQEFEDTEE.....T..F.EY.SLVEKY.EEQLL.R.P.FNMAA...T..HHKDEVA
Retrocopy
TISSVSEAEFDAKVGFMEDVVMDGEFYVLLRSFMDK*YQEFEDTEEYRRLRTN-FDEYLSLVEKYTEEQLLTRVPRFNMAAPIATGKHHKDEVA


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide