RetrogeneDB ID:
retro_mputfur_1374
Organism:
Location:
GL897101.1:539147-539500 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
73.11 %
Coverage:
100.0 %
Frameshifts:
1
Stop codons:
2


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1374
GCTTTTAAAGACACTGGGGAGACATCGTGGGACCAGAGGCGGTGTTTCACAGAACTAGAA
ATATTCTCACCAGCTGCAGTGTAAAATCTTTAAAGAAGGTACATGTTGACTTGATCAGAG
GCACAAAGGAAAAGAATCTCAAAGTGAAAGGACCAGTTCGGATGCCTACCAAGACTCTGA
AAATCACTACAAGAAAAACTCCTTGAGGTGAAGGTTCTAAGACTTGGGATCATTTTTGGA
TGAGGCTCCAAAAGCATCTCATCAACTGGCACTGTTCTTGTGAGATTCCTAAATAGATTA
CTTCCATCAGTATTGTGCCAGGAGTTGAGGCTGAAGTCACCATTGCAGATGCT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
AFKDTGKTP-VEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQ
AFKDTG.T..V.PE...HR.R..LTS..VKSL.KV..DLIRG.KEKNLKVKGPVRMPTKTL.ITTRKTP.GEGSKTWD.F.MR..K.LI..H...EI.K.
Retrocopy
AFKDTGETS/VGPEAVFHRTRNILTSCSVKSLKKVHVDLIRGTKEKNLKVKGPVRMPTKTLKITTRKTP*GEGSKTWDHFWMRLQKHLINWHCSCEIPK*


Parental protein
ITSISIEPGVEVEVTIADA
ITSISI.PGVE.EVTIADA
Retrocopy
ITSISIVPGVEAEVTIADA


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide