RetrogeneDB ID:
retro_mputfur_1383
Organism:
Location:
GL897106.1:325093-325546 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
65.58 %
Coverage:
75.86 %
Frameshifts:
0
Stop codons:
3


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1383
TCAGGAGTCCAGTTGGGGGAAGTATTCTTAGAAACAGAATGGCAGTTGTAGGAGTTGCAG
GATGACAGCCACCTGCTGTTCTAACACGTGCCAATGGGTGGAATGGATAGGATGAAGACA
GGAAGCGTTCTCCACTACATAGCGGAGAAACGCCATCTCTTCTGTGAGGACCTCAAGGGG
AGAACCGTCATTGACATGCACATGGAGGGGACACTGGATCTGCTGGAACTGATTATCATT
CATCCTTTCTTGAAACCAGATGACCAACAAAAACAGCTAGTTAAAATGTCCTGGAAGGCT
ATAATTAGATACAAGTCTGGGTTTGAAAAGGTTTTAAGGGATCAGGGGAAAAGATTTCTT
ATTGGTAATCAGCTGAGCCTTATGGACTTGATTCTGCTCCATATCATTTTGGCTCTAGAA
TAGAAAGTTTCTACTACCCTGTCGGCACCTCCA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
AGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEIDGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKEVVNMA
.GV...E.FLET..QL..LQD..HLLF..VPM...D.MK...T.S.LHYIA.K.HLF..DLK.RT.IDM..EGTLDLLELII.HPFLKPDDQQK..V.M.
Retrocopy
SGVQLGEVFLETEWQL*ELQDDSHLLF*HVPMGGMDRMK---TGSVLHYIAEKRHLFCEDLKGRTVIDMHMEGTLDLLELIIIHPFLKPDDQQKQLVKMS


Parental protein
QKAIIRYFPVFEKVLRDHGQRFLVGNELSLADVILLQTILALEEKIPNILSAFP
.KAIIRY...FEKVLRD.G.RFL.GN.LSL.D.ILL..ILALE.K....LSA.P
Retrocopy
WKAIIRYKSGFEKVLRDQGKRFLIGNQLSLMDLILLHIILALE*KVSTTLSAPP


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide