RetrogeneDB ID:
retro_mputfur_1385
Organism:
Location:
GL897106.1:1138960-1139391 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
67.11 %
Coverage:
100.0 %
Frameshifts:
3
Stop codons:
3


Parental gene:
Parental gene symbol:
Rpl26
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein L26 [Source:MGI Symbol;Acc:MGI:106022]

Genomic region (view in browser)





>retro_mputfur_1385
ATGAAATTCAGTCCCTCTGTGACTTCTGACTTGAGCAAGAACTGTAAAAAGGCACTTTCA
TGCACTTTCTCACATCTACAGGAAGAATATGTCTTCCTTTCTTTCCAAAATCTCAGACAG
AAGTACAACGTTGAATGTATGCCCATACAAAAAGATGATAAAGTACAGGTTGGGTGAGGA
CACTACAAAGGTCAGCAAATTTGCAAAGTAGCCCAGCTTTACAGGACAAAAGATGTCGAC
ATGAACACTCAATGAGTACAGTGGGAGAAAGCAAATGGCCCAGCTCCCCGTGTGGACATC
TACCCTAGCAAAATGGTTATCACCAAATTAAAATTGGATAAAAACCACAAAAATTCCTTG
AATAAAAAGCCAAATTGCACCAAGTACAAAAGGGCAAATATAAGGAAGAAACAACTGAGA
AGATGCAAGAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MKFNPFVTSDRSKNRK-RHFNAPSHIRRKIMSSPLSK-ELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYV-IYIERVQREKANGTTVHV
MKF.P.VTSD.SKN.K.RHF.A.SHI.RK.MSS.LSK..LRQKYNV..MPI.KDD.VQV..GHYKGQQI.KV.Q.YR.K.V......VQ.EKANG....V
Retrocopy
MKFSPSVTSDLSKNCK\RHFHALSHIYRKNMSSFLSK/NLRQKYNVECMPIQKDDKVQVG*GHYKGQQICKVAQLYRTKDVDMNTQ*VQWEKANGPAPRV


Parental protein
GIHPSKVVITRLKLDKDRK-KILERKAKSRQVGKEKGKYKEETIEKMQE
.I.PSK.VIT.LKLDK..K.K.LE.KAK..QV...KGKYKEET.EKMQE
Retrocopy
DIYPSKMVITKLKLDKNHK/KFLE*KAKLHQV--QKGKYKEETTEKMQE


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide