RetrogeneDB ID:
retro_mputfur_1387
Organism:
Location:
GL897106.1:2595708-2595941 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
78.48 %
Coverage:
84.78 %
Frameshifts:
1
Stop codons:
0


Parental gene:
Parental gene symbol:
LAMTOR5
Parental gene aliases:
No gene alias available
Parental gene description:
late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:HGNC Symbol;Acc:17955]

Genomic region (view in browser)





>retro_mputfur_1387
TTGGAAGACAACCCCATTCTTGGGGTTCTGTGCACAGATTCACAAAGACTTGATTTGGGC
TGCCATGGGGCCTTGTCAGATGAGCATGCTGGGGTGATCTCTCTTCTAGCCCAGAAAGCA
GCTAAGCTAACCTCACACCCCACTGACATTCCTGTGGTTGTCAAGAATCAGATAATGGGA
ACATTATGATCTGGGAACATGATGGCATCACAGTGGCTGTGCACAAAATGGCT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MKNPSIVGVLCTDSQGLNLGCRGTLSDEHAGVISVLAQQAAKLTSDPTDIPVV-CLESDNGNIMIQKHDGITVAVHKMA
.....I.GVLCTDSQ.L.LGC.G.LSDEHAGVIS.LAQ.AAKLTS.PTDIPVV.C.ESDNGNIMI..HDGITVAVHKMA
Retrocopy
LEDNPILGVLCTDSQRLDLGCHGALSDEHAGVISLLAQKAAKLTSHPTDIPVV/CQESDNGNIMIWEHDGITVAVHKMA


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide