RetrogeneDB ID:
retro_mputfur_1393
Organism:
Location:
GL897108.1:3151630-3152034 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
76.47 %
Coverage:
51.33 %
Frameshifts:
1
Stop codons:
3


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1393
AAAGTGAGAAAGACCTTTGTGGGAACAAAAGGAATCCCCCATCTGGTGATCCATGATGCC
CACACCATCTGCTATTCTGATCCCCTCATCAAAGTGAATGACACAATTTAGATTGATTTG
GAGACTGGAAATATTACCATTTTCACCATCTCTGACACTGGTAATCTGTGCATGGTGACC
TGAGGTGCTAATCTGGAAAGAATTGGTGTGATCACCAGTTGAGAGAGTTACCTTTGTTCT
CTTGATATGGTTCATGTGAAAGATGCCAATGTCAACAGCTTTGCCACCTGGCTCTCCAAT
ATTTTGTTATTGGCAAACTCAAAAAGCCATGGATTTCTCTTCCCCATGGAAAGGGTATCC
ACCTCACCACTGCTGAAGAGAGAGATAAGAGACTGGTGGCCAGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
KVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFAPRLSN
KVRK.FVGTKGIPHLV.HDA.TI.Y.DPLIKVNDTI.IDLETG.IT.F...DTGNLCMVT.GANL.RIGVIT..E....S.D.VHVKDAN.NSFA..LSN
Retrocopy
KVRKTFVGTKGIPHLVIHDAHTICYSDPLIKVNDTI*IDLETGNITIFTISDTGNLCMVT*GANLERIGVITS*ESYLCSLDMVHVKDANVNSFATWLSN


Parental protein
I-FVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAK
I.FVIGK..KPWISLP.GKGI.LT.AEERDKRL.A.
Retrocopy
I/FVIGKLKKPWISLPHGKGIHLTTAEERDKRLVAR


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide