RetrogeneDB ID:
retro_mputfur_14
Organism:
Location:
GL896900.1:7899104-7900028 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
99.34 %
Coverage:
98.38 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_14
ATGGAATTGAAACAGGAAATGGCTGGAAATCTTTTGAAGACATCATCTTTGACTGTAAGG
AAAAAATTACTGCATCAGATGGGAGTATCACTTTATAATACATCTCATGGGTTCCATGAG
GAAGAATTAAAAAAAAAACTTCAGCAGTTTCCTGGTGGATCCGTTGACCTTCAGAAGGAA
GACAGTGGCATTGGCATTCTTACTCTGAATAATCCAAGTAAAATGAATGCCTTCTCAGGT
GTTATGATGCTACAACTTCTGGAAAGAGTGATTGAATTGGAAAATTGGACAGAGGGGAAA
GGTCTCATTGTCCGTGGGGCAGGAAATACTTTCTCCTCAGGATCTGATTTGAATGCTGTG
AAAGCATTAGCAACTCCAGAGGATGGACTGGTCTTATGTATGTTCATGCAGAACACGTTA
ACAAGATTGATGAGACTCCCTTTAATAAGTGTTGCGCTGATTCAAGGTCGGGCATTGGGT
GGAGGAGCAGAAGTTACTACAGCATGTGATTTCAGATTAATGACTGCAGAGAGTGAGATC
AGATTTGTCCACAAAGACATGGGTATAATACCAAGCTGGGGCGGTGCTACCCGACTAAGT
AAAATCATTGGCAGTAGGCAGGCTCTCAAAGTGTTAAGCGGGGCTCTCAAATTGGATTCA
AAAAAAGCTCTAGACATAGGAATGGCTGAAGAGATCTTGCAGTTTACAGACGAAACTGAA
TGTCTAAGGGAGGCACGAGAATGGCTAACACAGTTTACCAGAGGGCCACCGGAAGTAATT
AGAGCTTTGAAAACGTGTGTTTCTTCAGGCAAAGAGCTTTGTTTCGAGGAGGCATTACAG
ATTGAAAAAGACCTAGTAGGAAGAGTTTGGGGTGGACCTGCAAATAAAGAGGCTATTGCC
AGGAAAGGTAAATTTAATAAATAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
EMAGNLLKTSSLTVRKKLLHQMGVSLYNTSHGFHEEELKKKLQQFPGGSVDLQKEDSGIGILTLNNPSKMNAFSGVMMLQLLERVIELENWTEGKGLIVR
EMAGNLLKTSSLTVRKKLLHQMGVSLYNTSHGFHEEELKKKLQQFPGGSVDLQKEDSGIGILTLNNPSKMNAFSGVMMLQLLERVIELENWTEGKGLIVR
Retrocopy
EMAGNLLKTSSLTVRKKLLHQMGVSLYNTSHGFHEEELKKKLQQFPGGSVDLQKEDSGIGILTLNNPSKMNAFSGVMMLQLLERVIELENWTEGKGLIVR


Parental protein
GAGNTFSSGSDLNAVKALATPEDGLVLCMFMQNTLTRLMRNRLPLISVALIQGRALGGGAEVTTACDFRLMTAESEIRFVHKDMGIIPSWGGATRLSKII
GAGNTFSSGSDLNAVKALATPEDGLVLCMFMQNTLTRLM..RLPLISVALIQGRALGGGAEVTTACDFRLMTAESEIRFVHKDMGIIPSWGGATRLSKII
Retrocopy
GAGNTFSSGSDLNAVKALATPEDGLVLCMFMQNTLTRLM--RLPLISVALIQGRALGGGAEVTTACDFRLMTAESEIRFVHKDMGIIPSWGGATRLSKII


Parental protein
GSRQALKVLSGALKLDSKKALDIGMAEEILQFTDETECLREAREWLTQFTRGPPEVIRALKTCVSSGKELCFEEALQIEKDLVGRVWGGPANKEAIARKG
GSRQALKVLSGALKLDSKKALDIGMAEEILQFTDETECLREAREWLTQFTRGPPEVIRALKTCVSSGKELCFEEALQIEKDLVGRVWGGPANKEAIARKG
Retrocopy
GSRQALKVLSGALKLDSKKALDIGMAEEILQFTDETECLREAREWLTQFTRGPPEVIRALKTCVSSGKELCFEEALQIEKDLVGRVWGGPANKEAIARKG


Parental protein
KFNK
KFNK
Retrocopy
KFNK


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide