RetrogeneDB ID:
retro_mputfur_140
Organism:
Location:
GL896914.1:14973919-14974510 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
85.34 %
Coverage:
98.96 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
RHOA
Parental gene aliases:
No gene alias available
Parental gene description:
ras homolog family member A [Source:HGNC Symbol;Acc:667]

Genomic region (view in browser)





>retro_mputfur_140
ATGGCGGCCATCCGCAAGAAGCTGGTGGTGGTGGGCGACGGCGCGTGCGGCAAGACGTGC
CTGCTGATCGTGTTCAGTAAGGACGAGTTCCCCGAGGTGTACGTGCCCACCGTCTTCGAG
AACTATGTGGCCGACATCGAGGTGGACGGCAAGCAGGTGGAGCTGGCGCTGTGGGACACG
GCGGGCCAGGAGGACTACGACCGCTTGCGGCCGCTCTCCTACCCGGACACCGACGTGATC
CTCATGTGCTTCTCCGTGGACAGCCCCGATTCGCTGGAGAACATCCCCGAGAAGTGGGTG
CCCGAGGTGAAGCACTTCTGCCCCAACGTGCCCATCATCCTGGTGGCCAACAAGAAAGAC
CTGCGCAGCGACGAGCACGTCCGCACGGAGCTGGCCCGCATGAAGCAGGAACCCGTGCGC
ACGGATGACGGCCGCGCCATGGCCGTGCGCATCCAAGCCTACGACTACCTCGAGTGCTCG
GCCAAGACCAAGGAGGGCGTGCGCGAGGTCTTCGAGACGGCCACGCGCGCCGCGCTGCAG
AAGCGCTACGGCTCCCAGAACGGCTGCATCAACTGCTGCAAGGTGCTATGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWT
MAAIRKKLV.VGDGACGKTCLLIVFSKD.FPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFS.DSPDSLENIPEKW.
Retrocopy
MAAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWV


Parental protein
PEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARRGKKKSGCL
PEVKHFCPNVPIILV.NKKDLR.DEH.R.ELA.MKQEPV....GR.MA.RI.A..Y.ECSAKTK.GVREVFE.ATRAALQ.R.G....GC.
Retrocopy
PEVKHFCPNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKRYG-SQNGCI


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide