RetrogeneDB ID:
retro_mputfur_1400
Organism:
Location:
GL897113.1:2609274-2609827 (-)
Status:
KNOWN_PSEUDOGENE
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
85.03 %
Coverage:
78.97 %
Frameshifts:
3
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1400
GCCATTACAAAAACAGAGATCTCAGATTTCCAAACTGATAGACCAAAACCTGGGGCAGAG
GCAAATGTAAATGCATACAAAGAGTGCCCTCTGGAATTTCCTTAAATACGTGGCGTAAAT
TTCAAGAATTGCATAAAAAACATTCTGAACAGAAAAACCTCAACTTCGGGATTCAAAAGG
AAGAAAAGAAAACGCTCCAGAAAAGGTAAATTGAAGAATGAAGCAGAGTCTCATAGTGAA
CAGACCTCAAGTGAAACCCAGTGGAAGGAGCTTACTCAGTATTTTGGAATCAATGATAGG
TTTGAGCCCCTGTTAAAAAGAAAAAAAATGGACAAGTTGGGTCTTGAAAAGAGCATAGAC
CAGGCTGTGGAACAGTGGAATATCAAGAAGGCTGAGGAACTCAGCAACCAGCTAGCTACT
CGAGAGCTTGGTGTAAAAATTGCTAAGGAAGCTGCCTGCCACAACTTTGCAAAAGTCAAA
AAGGATGCTGAAAATTCACAGGTTGCCCGAAAAAAAGAAGAAGCTTGCATGGGGGTTTGA
AGCAAAGAAGAGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
AITKTEISDGQNDGPKPGAEANVNAYKECP-SGIPLNMWHKFQELHKKHAEQK-TSTSGFRRKKRKRSRKGKLKNEEETHSEQTSSETQWKELTQYFGIN
AITKTEISD.Q.D.PKPGAEANVNAYKECP.SGI.LN.W.KFQELHKKH.EQK.TSTSGF.RKKRKRSRKGKLKNE.E.HSEQTSSETQWKELTQYFGIN
Retrocopy
AITKTEISDFQTDRPKPGAEANVNAYKECP/SGISLNTWRKFQELHKKHSEQK\TSTSGFKRKKRKRSRKGKLKNEAESHSEQTSSETQWKELTQYFGIN


Parental protein
DRFDPPVKKKKVDKSGLEKSIDQAVEEWNIEKAEELSNQLATRELGVKIAKAVACHNFVKAKKDAENSQVAR-KKKKLAWGFEAKKR
DRF.P.......DK.GLEKSIDQAVE.WNI.KAEELSNQLATRELGVKIAK..ACHNF.K.KKDAENSQVAR.KKKKLAWGFEAKKR
Retrocopy
DRFEPLXXXXXXDKLGLEKSIDQAVEQWNIKKAEELSNQLATRELGVKIAKEAACHNFAKVKKDAENSQVAR\KKKKLAWGFEAKKR


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide