RetrogeneDB ID:
retro_mputfur_142
Organism:
Location:
GL896899.1:24059973-24061029 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
98.29 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_142
ATGCCCAGTGAAACTCTCTGGGAAATTGCAAAAGCCGAAGTGGAAAAACATGGAAGTAGT
GGAGGTGAAGGTGATGGGCTTGAAATTGGAGAAAAATCTGTTTTCTTCATTGGCAGTAAA
AATGGGGGAATGACTACTATTATTCTAAGGTGTCTTGACAGGGATGAGCCACCAAAACCA
ACATTAGCTTTGGAATATACATATGGAAGAAGAGCAAAAGGGCATAATATACCAAAAGAT
ATTGCTCACTTCTGGGAACTAGGTGGAGGAACGTCTTTATTGGACTTAATCAGCATCCCC
ATCACAAGTGATACCTCACGGACATTTTCTCTTGTTCTTGTTTTGGATCTTTCGAAACCT
AATGACCTTTGGCCCACCATGGAAAATCTGTTGCAAGCCACAAAAAGCCATGTGGATAAA
ATGATAATGAAACTGGGCAAGACCAATTCTAAAGCAGCTTCTGAAATGAGACAGAAGATA
TGGAGTAATATGCAGAAGGACCATCCAGATCATGAATTAATCGACCCATTTCTAAAACCT
CTGGTCATAATTGGAAGTAAATACGATATTTTTCAGGATTTTGACTCTGAGAAGAGGAAG
GTTATATGCAAGACCCTTCGATTTGTTGCACATTATTATGGAGCATCGTTAATGTTTACC
AGTAAATCAGAAGCTCTATTACTAAAAATACGTGGAGTTATCAACCAGTTAGCATTTGGC
ATTGACAAAAGCAAATCAATATGTGTGGATCAGAATAAACCACTGTTTATCACAGCAGGA
TTGGATTCTTTAAGTCAAATAGGATCTCCTCCTGTTCCTGATAATGATATTGGAAAACTT
CATGCCCATTCACCAATGGAGTTGTGGAAGAAAGTGTATGAAAGGGTCTTTCCACCAAAG
AGTATCAACACACTAAAAGATATCAAGGACCCTGCAAGAGACCCTCAGTATGCTGAAAGT
GAAGTTGATGAAATGAGAATTCAGAAGGATCAGGAACTGGAACAATACAAAAGAAGTTCT
TCCAAGTCTCGGAAACAAATTGAGCTTGATTCTTGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MPSETLWEIAKAEVEKHGSSGGEGDGLEIGEKSVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRAKGHNIPKDIAHFWELGGGTSLLDLISIP
MPSETLWEIAKAEVEKHGSSGGEGDGLEIGEKSVFFIGSKNGG.TTIILRCLDRDEPPKPTLALEYTYGRRAKGHNIPKDIAHFWELGGGTSLLDLISIP
Retrocopy
MPSETLWEIAKAEVEKHGSSGGEGDGLEIGEKSVFFIGSKNGGMTTIILRCLDRDEPPKPTLALEYTYGRRAKGHNIPKDIAHFWELGGGTSLLDLISIP


Parental protein
ITSDTLRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKMIMKLGKTNSKAASEMRQKIWSNMQKDHPDRELIDPFLIPLVIIGSKYDIFQDFDSEKRK
ITSDT.RTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKMIMKLGKTNSKAASEMRQKIWSNMQKDHPD.ELIDPFL.PLVIIGSKYDIFQDFDSEKRK
Retrocopy
ITSDTSRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKMIMKLGKTNSKAASEMRQKIWSNMQKDHPDHELIDPFLKPLVIIGSKYDIFQDFDSEKRK


Parental protein
VICKTLRFVAHYYGASLMFTSKSEALLLKIRGVINQLAFGINKSKSICVDQNKPLFITAGLDSLSQIGSPPVPDNDIGKLHAHSPMELWKKVYERVFPPK
VICKTLRFVAHYYGASLMFTSKSEALLLKIRGVINQLAFGI.KSKSICVDQNKPLFITAGLDSLSQIGSPPVPDNDIGKLHAHSPMELWKKVYERVFPPK
Retrocopy
VICKTLRFVAHYYGASLMFTSKSEALLLKIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSLSQIGSPPVPDNDIGKLHAHSPMELWKKVYERVFPPK


Parental protein
SINTLKDIKDPARDPQYAESEVDEMRIQKDQELEQYKRSSSKSWKQIELDS
SINTLKDIKDPARDPQYAESEVDEMRIQKDQELEQYKRSSSKS.KQIELDS
Retrocopy
SINTLKDIKDPARDPQYAESEVDEMRIQKDQELEQYKRSSSKSRKQIELDS


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide