RetrogeneDB ID:
retro_mputfur_1421
Organism:
Location:
GL897125.1:786357-787089 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
96.31 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
2


Parental gene:
Parental gene symbol:
C14orf166
Parental gene aliases:
No gene alias available
Parental gene description:
chromosome 14 open reading frame 166 [Source:HGNC Symbol;Acc:23169]

Genomic region (view in browser)





>retro_mputfur_1421
ATGTTCCGACGCAAGCTGACGGCCCTTGACTACCACAACCCGGCTGGTTTCAACTGCAAA
GATGAAACAGAATTTAGAAACTTTATTGTTTGGCTTGAAGACCAGAAAATCAGACACTAC
AAGATTGAAGACAGAGGTAATTTAAGAAACATCCACAGCAGTGACTGGCCCAAGTTCTTT
GAAAAGTATCTCAAAGATGTTAACTGTCCTTTCAAGATTCAAGATCTACAAGAAGCAGTT
GACTGGCTTCTTGGTTTAGCTGTTAGACTTGAATATGGAGATAATGCTGAAAAATACAAG
GACTTGGTATCTGATAACACAAAAAATGCTGACAATGCAGCTAAAAATGCAGAGCCATTG
ATCAATTTGGATGTAAATAATCCTGGTTTTAAGGCTGATGTAATGGCTTTGGCTAACCTT
CTTCAGATTCAGCGTCATGATCATTAACTGGTAATGCTTAAGGCAATTCGCATTTTGGTC
CAGGAGCGCCTGACATAGGATGCAGTTGCTAAAGCAAATCAAACGAAAGAGGGCTTGCCT
GTTGCTTTAGACAAACATATTCTTGGTTTTGACACAGGAGATGCAGTTCTTAATGAAGCT
GCTCAAATTCTGCGATTGCTGCATATAGAAGAGCTCAGAGAGCTACAGACAAAAATTAAT
GAAGCCATAGTAGCTCTTCAGGCAATTATTGCTGATCCAAAGACAGACCACAGACTGGGG
AAAGTTGGAAGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MFRRKLTALDYHNPAGFNCKDETEFRNFIVWLEDQKIRHYKIEDRGNLRNIHSSDWPKFFEKYLKDVNCPFKIQDRQEAIDWLLGLAVRLEYGDNAEKYK
MFRRKLTALDYHNPAGFNCKDETEFRNFIVWLEDQKIRHYKIEDRGNLRNIHSSDWPKFFEKYLKDVNCPFKIQD.QEA.DWLLGLAVRLEYGDNAEKYK
Retrocopy
MFRRKLTALDYHNPAGFNCKDETEFRNFIVWLEDQKIRHYKIEDRGNLRNIHSSDWPKFFEKYLKDVNCPFKIQDLQEAVDWLLGLAVRLEYGDNAEKYK


Parental protein
DLVPDNTKNADNAAKNAEPLINLDVNNPDFKAGVMALANLLQIQRHDDYLVMLKAIRILVQERLTQDAVAKANQTKEGLPVALDKHILGFDTGDAVLNEA
DLV.DNTKNADNAAKNAEPLINLDVNNP.FKA.VMALANLLQIQRHD..LVMLKAIRILVQERLT.DAVAKANQTKEGLPVALDKHILGFDTGDAVLNEA
Retrocopy
DLVSDNTKNADNAAKNAEPLINLDVNNPGFKADVMALANLLQIQRHDH*LVMLKAIRILVQERLT*DAVAKANQTKEGLPVALDKHILGFDTGDAVLNEA


Parental protein
AQILRLLHIEELRELQTKINEAIVAVQAIIADPKTDHRLGKVGR
AQILRLLHIEELRELQTKINEAIVA.QAIIADPKTDHRLGKVGR
Retrocopy
AQILRLLHIEELRELQTKINEAIVALQAIIADPKTDHRLGKVGR


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide