RetrogeneDB ID:
retro_mputfur_1423
Organism:
Location:
GL897126.1:1213701-1213979 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
56.38 %
Coverage:
79.49 %
Frameshifts:
1
Stop codons:
1


Parental gene:
Parental gene symbol:
RPL36
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein L36 [Source:HGNC Symbol;Acc:13631]

Genomic region (view in browser)





>retro_mputfur_1423
CCAGAGAGGAGCAGCAGCCCCAACTGCGCGCTGCCCTACGGCAGGGGCCGCAACAACGGT
CGCAAGGTGAGTAAGAACATGAGCAAGCCGAGGCGCGGCCATCGCTGCGGGCGCACCACG
AAGCACACCATGTTCGAGCAGGACGTGATTGGAGAGATGAGCGGCTTTGCCCTTTATGCC
TGACGTGCCATAGAGCTGTGCAAGGTCTCCAGGGACAAGCCTGTATTAAGTCCATCAAGA
AAAGGGTGGAGACACACATCTATGCCAAGAGAAAGAGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
PLPSAAMALRYPMAVGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRAL-KFIKKRVGTHIRAKRKR
P..S.......P...G.N.G.KV.KN.SKPR...R.GR.TKHT.F..D.I.E..GFA.Y..RA.EL.KVS.DK..L.K.IKKRV.THI.AKRKR
Retrocopy
PERSSSPNCALPYGRGRNNGRKVSKNMSKPRRGHRCGRTTKHTMFEQDVIGEMSGFALYA*RAIELCKVSRDKPVL/KSIKKRVETHIYAKRKR


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide