RetrogeneDB ID:
retro_mputfur_1427
Organism:
Location:
GL897128.1:2337321-2337822 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
69.46 %
Coverage:
59.86 %
Frameshifts:
0
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1427
AAGGAAACTTTCACAATGCTCCTTGCAGCAGAAACCTACCTAGGTGGCCCCAACCTTGAC
TTCCAAAAGGAACAGTCCATCTACAAAAGGAAAAGTGATAGCATCTCTGTCACGAATCTG
ATGAGAAGCTGAGAGAAGCTTCTGCTGGAAGCTTGCACCATTGTTGCCATTGAAAACCCA
GCTGATGTCAGGGTCATGTGGTCTAGGAACACTGGCCAGCAAGCTGTGCTGAAATTTGCT
GCTCCTCCTGGAGCCACTCCCGTTGCTGGCCACTTCACTCCTGGAACATTCACTAACGAG
ATCCAGGCAGCTTTCTACGATTCCAGCCTTCTGGTGGTTATAGATCCTGGGGCTGACCAC
CGGCCTCTCACAGCGATGTGTTATGTTAACCTGGCCACTGTTGCTCTGTGTAACACTGAC
TCTCCCCTGTGCTGGGGGGACATCACCATCCCTTACAACAAGAAGAGAGCTCACTCTGCA
GGTCTGATGTGGTGGGTGTTG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
EEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ
.E.....LAA.T.LGG.NLDFQ.EQ.IYKRKSD.I...NL.R..EKLLL.A..IVAIENPADV.V..SRNTGQ.AVLKFAA..GATP.AG.FTPGTFTN.
Retrocopy
KETFTMLLAAETYLGGPNLDFQKEQSIYKRKSDSISVTNLMRS*EKLLLEACTIVAIENPADVRVMWSRNTGQQAVLKFAAPPGATPVAGHFTPGTFTNE


Parental protein
IQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWML
IQAAF....LLVV.DP.ADH.PLT...YVNL.T.ALCNTDSPL...DI.IP.N.K.AHS.GLMWW.L
Retrocopy
IQAAFYDSSLLVVIDPGADHRPLTAMCYVNLATVALCNTDSPLCWGDITIPYNKKRAHSAGLMWWVL


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide